Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0537 ATGGAATCTGCTTTGTGCCTCAACATGCCGATGCAGATACAGATGAGTTTAAAGCCACTCTTCAAACCTCTCAACCGTCAATTCGCCACGTGGACGATTCAATCAGCAGCGAAACAGAAGCCATCACTCGTCTTCCGCTTCAACCACTCGTCTCAGCTGCCTCCTCTACGCTGCGTTTCCAGCTCAGCTGGTGGTGGTGACATTCCCTCCGATGCTATTGTTCTCAACGTTGAGGGTATGATGTGCGACGGCTGCGCCAATAACGTCAGGAAGCTTCTAGAAAGCCGACCACAAGTGTCATCTGCTACTGTGAATCTAACCGCCGCTAAAGCAGTAGTGTCTGCCGTATCCGAAGAAAAAGGTTCCCCCAACTGGCAGAAGCAATTAGGAGAAGCACTTGCTCAGCATTTAACTAACTGCGGTTTCAATTCTACCTTTCAAGGCGAGTGA 450 0.4978 MESALCLNMPMQIQMSLKPLFKPLNRQFATWTIQSAAKQKPSLVFRFNHSSQLPPLRCVSSSAGGGDIPSDAIVLNVEGMMCDGCANNVRKLLESRPQVSSATVNLTAAKAVVSAVSEEKGSPNWQKQLGEALAQHLTNCGFNSTFQGE* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0537 149 Pfam Heavy-metal-associated domain 74 120 IPR006121 GO:0046872
Ahy10g0537 149 PANTHER COPPER-TRANSPORTING ATPASE PAA1, CHLOROPLASTIC 63 145 - -
Ahy10g0537 149 CDD HMA 74 142 IPR006121 GO:0046872
Ahy10g0537 149 PANTHER ATP7, ISOFORM B 63 145 - -
Ahy10g0537 149 ProSitePatterns Heavy-metal-associated domain. 77 106 IPR017969 GO:0046872
Ahy10g0537 149 Gene3D - 71 148 - -
Ahy10g0537 149 SUPERFAMILY HMA, heavy metal-associated domain 73 118 IPR036163 GO:0046872
Ahy10g0537 149 ProSiteProfiles Heavy-metal-associated domain profile. 72 146 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0537 Ahy-Chr10 5323430 5324500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0537 65 145 Primary Pumps ATPases AT4G33520 59.756 6.58e-28 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0537 - K17686 adu:107468605 297.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0811 20 10401081 10402169 Ahy10g0537 10 5323430 5324500 hybridization