Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0533 ATGGATAATCTCTGTTGCTTCAATTCTGTCTCTCAGGTGGTTGGAGGTCGTTCTTCATGTAGCTCCGGCAAGGGTAGGAGCTCTCAGTATGCAGTCAAGTATGGCTTCAGTCTAGTTAAAGGGAAAGCGAATCACCCAATGGAGGACTATCACGTGGCGAAATTTGTCCAGTCGAGAGGGCAAGAGCTAGGACTTTTCGCTATCTATGACGGACACTTGGGAGACACTGTTCCAGCATATCTACAAAAGCATCTGCTTTCTAATATCTTGAAGGAAGCAGACTTCTGGAATGATCCAAACAGTTCCATCATTAAGGCGTACGAGACAACGGATCAGGCCATTCTTTCTCACAATCCTGATCTGGGACGAGGCGGATCAACTGCAGTGACTGCAATTCTAATAAATAATCAGCAATTGTGGATAGCGAATGTTGGAGATTCACGAGCAGTTCTGTCACGGGGAGGGCAGGCCATACAGATGACGGTAGATCATGAGCCCAATACTGAAAGGGGCATAATCGAGAACAAAGGCGGATTTGTCTCAAACATGCCAGGAGATGTTGCAAGAGTGAACGGGCAGCTTGCAGTGTCTCGGGCATTCGGAGACAGAAACCTCAAATCGCACTTGCGATCTGATCCTGATGTACAACATTGTGACATTGAACAAGATACTGAGCTTTTGATTCTGGCTAGTGATGGTCTTTGGAAGGTAATGGCAAACCAAGAAGCAGTGGATATTGCGAAAAGGATCAAAGATCCTCAAAAGGCGGCGAAACAGCTAGCTGCGGAGGCATTGAACAGAGACAGTAAAGATGACATTTCATGCATTGTAGTTCGTTTCAAGTGA 846 0.461 MDNLCCFNSVSQVVGGRSSCSSGKGRSSQYAVKYGFSLVKGKANHPMEDYHVAKFVQSRGQELGLFAIYDGHLGDTVPAYLQKHLLSNILKEADFWNDPNSSIIKAYETTDQAILSHNPDLGRGGSTAVTAILINNQQLWIANVGDSRAVLSRGGQAIQMTVDHEPNTERGIIENKGGFVSNMPGDVARVNGQLAVSRAFGDRNLKSHLRSDPDVQHCDIEQDTELLILASDGLWKVMANQEAVDIAKRIKDPQKAAKQLAAEALNRDSKDDISCIVVRFK* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0533 281 SMART PP2C_SIG_2 44 280 IPR001932 -
Ahy10g0533 281 SMART PP2C_4 25 278 IPR001932 -
Ahy10g0533 281 SUPERFAMILY PP2C-like 27 281 IPR036457 -
Ahy10g0533 281 PANTHER PROTEIN PHOSPHATASE 2C 1 280 IPR015655 GO:0004722|GO:0006470
Ahy10g0533 281 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 1 280 - -
Ahy10g0533 281 CDD PP2Cc 32 280 IPR001932 -
Ahy10g0533 281 Pfam Protein phosphatase 2C 42 273 IPR001932 -
Ahy10g0533 281 Gene3D - 28 281 IPR036457 -
Ahy10g0533 281 ProSiteProfiles PPM-type phosphatase domain profile. 33 280 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0533 Ahy-Chr10 5266193 5269984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0533 1 281 PP2C-type Phosphatase Gene Family AT1G22280 69.686 1.34e-146 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0533 K17506 - gmx:100801722 464.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0805 20 10256081 10259822 Ahy10g0533 10 5266193 5269984 hybridization
Ahy13g4131 13 140841632 140846088 Ahy10g0533 10 5266193 5269984 PCT
Ahy3g3855 3 137973950 137978454 Ahy10g0533 10 5266193 5269984 PCT
Ahy10g0533 10 5266193 5269984 Ahy13g4131 13 140841632 140846088 PCT
Ahy10g0533 10 5266193 5269984 Ahy3g3855 3 137973950 137978454 PCT