Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0475 ATGATGAATTCCGAAGGTGGCAATGAAGATTGCTTAGGTTGGGCAGCAAGAGATGCATCTGGTGTTCTCTCACCATACAAATTCAGTCGCAAGGCTGTAGGAAACGATGATGTTTATGTTAAGATCACACACTGCGGTATTTGTTATGCTGATGTAGTTTCCACAAGGAATTCATTTGGTGCCACAAATTACCCTGTTGTGCCCGGACATGAGATTGCAGGCATTGTGACAAAGGTTGGTTCCAATGTCCAACGTTTCAATGTTGGTGACCATGTTGGAGTAGGGACTTATGTTAACTCGTGCCGCGACTGCCAAAATTGCAATGCAGGACTTGAAATTCAATGTGGTAAAGGACGAGTTTTTACTTATGATAGTGTTGATTCTGATGGTACAATCACAAAAGGAGGATACTCCACTTTCATAGTAGTTCATCATAGGTATTGTTTTATGATACCAAAGAGCTATCCATTGGCTTCAGCAGCACCTTTGCTCTGTGCCGGAATCACTGTTTATTCGCCGATGATTCGTCACAATATGAATCAGCCTGGTAAATCTCTAGGAGTTATTGGCCTTGGTGGCCTTGGACATATGGCAGTTAAATTTGGAAAGGCTTTTGGTTTGGATGTAACAGTTTTCAGCACCAGCATATCTAAAAAAGATGAGGCCCTAAATCTTCTTGGTGCAGATAATTTTGTTGTTTCATCTGATCAAGAACAAATGAGTGCATTGGCTGAGTCATTAGACTTTATAATTGACACAGCATCTGGTAATCACCCTTTTGATCCTTACATGTTTCTTCTGAAAACATGTGGTGTCTTAGTCTTAGTTGGGGCTCCAAGTGAAATCAAATTAAGCCCAGGAAGCCTTATTGGTGGGATGAGAAGCATTTCTGGAAGTGCTGCAGGAGGCACAAAAGATACCCAAGAGATGATTGATTTGTGTGCTGAAAAGGAGATTTATCCAAATATAGAAGTGATTCCCATTGAATATGCTAATGAAGCTTTTGAGAGGATCATAAACAAAGATGTCAAGTATAGGTTTGTGATAGACATTGAAAATTCCCTCAAGTAA 1071 0.4034 MMNSEGGNEDCLGWAARDASGVLSPYKFSRKAVGNDDVYVKITHCGICYADVVSTRNSFGATNYPVVPGHEIAGIVTKVGSNVQRFNVGDHVGVGTYVNSCRDCQNCNAGLEIQCGKGRVFTYDSVDSDGTITKGGYSTFIVVHHRYCFMIPKSYPLASAAPLLCAGITVYSPMIRHNMNQPGKSLGVIGLGGLGHMAVKFGKAFGLDVTVFSTSISKKDEALNLLGADNFVVSSDQEQMSALAESLDFIIDTASGNHPFDPYMFLLKTCGVLVLVGAPSEIKLSPGSLIGGMRSISGSAAGGTKDTQEMIDLCAEKEIYPNIEVIPIEYANEAFERIINKDVKYRFVIDIENSLK* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0475 356 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 69 83 IPR002328 GO:0008270|GO:0016491
Ahy10g0475 356 SUPERFAMILY GroES-like 17 184 IPR011032 -
Ahy10g0475 356 SMART PKS_ER_names_mod 21 349 IPR020843 GO:0016491
Ahy10g0475 356 Gene3D - 14 351 - -
Ahy10g0475 356 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 186 213 IPR029752 -
Ahy10g0475 356 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 319 IPR036291 -
Ahy10g0475 356 PANTHER ALDEHYDE REDUCTASE 8 355 - -
Ahy10g0475 356 Pfam Alcohol dehydrogenase GroES-like domain 36 149 IPR013154 -
Ahy10g0475 356 Gene3D - 166 321 - -
Ahy10g0475 356 CDD CAD1 13 350 - -
Ahy10g0475 356 Pfam Zinc-binding dehydrogenase 193 315 IPR013149 -
Ahy10g0475 356 PANTHER - 8 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0475 Ahy-Chr10 4774310 4776752 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0475 1 356 Monolignol Biosynthesis Gene Families AT1G72680 70.506 0.0 515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0475 K00083 - gmx:100807617 580.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0749 20 9576697 9579103 Ahy10g0475 10 4774310 4776752 hybridization