Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0461 ATGACTTTCAAGCGCAGAAACGGAGGAAGAAACAAGCATGGCCGTGGCCACGTCAAATTCATTCGCTGCTCCAATTGCGGCAAGTGCTGCCCCAAGGACAAATCAATCAAGAGGTTTCTTGTGAGGAACATTGTTGAGCAGGCTGCAGTTCGTGATGTTCAGGAAGCCTGTGTCTATGAGCAATACACTCTTCCGAAGCTGTATGTGAAGATGCAATATTGTGTTTCGTGTGCTATTCACTCTCACGTTGTGAGGGTGCGATCTCGCACTGATAGGAGGAACCGTGAGCCTCCGCAGCGCTTTGCTAGGCGCAGGGATGATGCACCAAGGCCCGGTCAACCTGGTCAAGCTCCTCGTCCTATTGGAGTTGGAGCTGGAGCTGGAGCTGCTCGTGCTTAG 399 0.5213 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKSIKRFLVRNIVEQAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRNREPPQRFARRRDDAPRPGQPGQAPRPIGVGAGAGAARA* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0461 132 PANTHER 40S RIBOSOMAL PROTEIN S26 1 125 IPR000892 GO:0003735|GO:0005840|GO:0006412
Ahy10g0461 132 Gene3D Ribosomal protein S26e 1 114 IPR038551 -
Ahy10g0461 132 PANTHER 40S RIBOSOMAL PROTEIN S26 1 125 - -
Ahy10g0461 132 MobiDBLite consensus disorder prediction 85 132 - -
Ahy10g0461 132 ProSitePatterns Ribosomal protein S26e signature. 73 80 IPR000892 GO:0003735|GO:0005840|GO:0006412
Ahy10g0461 132 MobiDBLite consensus disorder prediction 89 110 - -
Ahy10g0461 132 Pfam Ribosomal protein S26e 1 106 IPR000892 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0461 Ahy-Chr10 4540000 4541280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0461 1 116 Cytoplasmic Ribosomal Protein Gene Family AT3G56340 84.483 3.94e-70 205