Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0428 ATGCTCAAAATTATGTTGAGTTTTGTTCCAATTCATATATTCTTGTGGTCATTATTCTGTTTCTTCATGATTGTTTATGGAGCTGAATTAGGTGACATCAATTGCCTAAGAGAAATCAACAACTCATCGGACTCATCTAATCAAATATGGGATTTCAATTTCAATATCAACACCATAGATTTGTGCTCATCATTCACTGGTATTGAATGCATGACCAGTGGTATTGATGAAGAAAAAGTAATAAGTATCAAGCTTTCTAACATGGGGTTAGAAGGCCAATTTCCTCATTGCATTGAGAATTTCTCATGGCTGCAGAATCTGAACCTTTCACACAACAAGCTCTTTGGGAATATCCCACCTGATATTTCAAGTAAGCTTCCATATCTAACCTCACTTGACCTATCAAACAACAACTTTTATGGTGAAATCCCAAAGGCTATTGCAAACTTGTCTTACTTGAATACCCTTAGACTTGATGGTAACCAGTTAAATGGAACAATCCCAAAAGAACTTGGCTTTCTTCCAAGGATCACAGTGTTCAGTGTTGCAAACAATTTGTTATCAGGGCCAGTGCCTGTGTTTGTGAACAATAATGTTAATGTTACCTTGAGCTATGTCAATAATAATGGACTCTGTGGGGGAACAACATTGGAAAGCTGTGATGAAGAGAGCTTATTTGGTAAACCCTTTTGGTATAGTTTTGTTATTGCTTTTGTTTGTTCAGCAACTTCTGTCATAGTAACTTTCATGGACTATACTCAACCTTGGAATGAATTCAAAAAGAGTAGTAGGAAGAGTAACACCATATATCCCTTGAGAAAAGAACAGAACAACCAAAAGCATACCACTAATGTAGCTCAATTGCTTCCACTGGCTTTGCAAGAGGAAGGAAATAAAGAGCTCTGTAGATTGTTGGAGAGATTGATACCAAGAATGAGCTTCATGGAGCTTTGCAAAGCAACTAACTACTTTAGCTCAAACAACATCATGGGGTTAGGAACAACAGGGATAATGTATAAGGCAGAGGTTTCAAATAACTGTTTGATAGCAGTGAAGAGATTCTATTATTCTGACAAGTACAAGAGACAATTCTTGCTTGAAACAATGATTCCAGGGAGACACATGCACCGAAACATAGCCTCTCTGCTTGGATTCTGCATAGAGAAGAAGGAGAGGATACTAGTCTATAGCTACATCTCAAATGGAACATTATGTCACTGGTTACATAATTCTCAATTGGAATGGCCTGAGAGGATTCACATTGCAATTGGGATAGCAAGGGGATTATCTTGGCTTCACAAAAAGTGCAAGATCATACACCTCAATCTATCTTCTGAATGTGTCTTGCTAGACAAGAATTTCGAGCCAAAAATTTCGAATTTCGGCAAAGCAAAGTTCATCATGAACCAAAAGAATCATGCAAGGATGAGACTGTTTCTGGTTGATGAAGTCATTGGGGTGAAGGGTTCTTTTGAGAAGGATATCTATGACTTTGGAATAATCCTTTTTGAGCTTATAACAGGACAAAAATTAAGCATAAGTAGTGATTCTTGTTCTACTAATTATGATGATGACATTGGTGTTGATAATAGCTCTTTGAGGAGCTATATTAGCAATAGGTTGTTCACTGATCCTAGTGATTTTTATTATGCCACTGACAAATGCATAACTGGGAAAGGGTTTGATGATAAAATTCATGGCCTCCTAGAAGTTGCATGCAAATGTGTTAAACCTTCTATGGAACAGAGGCCAAAGATGGATGATGTGTATAGAACTATTACAGCCTTGTGGAAAGGGGTGGCAACGGGGCGGGTTTTTGCTCTACCCGACCCCGTTCCGCTCAACAAAAACCTGCATCGAACCCGCCCTACTTCTATCCGCGGAGTAGATGGGGTAGAAGATTCTCCAAAAGAGTATTTGAAAGTCCATAATGATGCACGAGCAAGCGTTGGGGTTCCTCCGCTAAAGTGGCATGTGAAATTAGCAAAAGAAGCTCAAAAGCATTTGATTAAATTCATCCATAATTGTCTCATGGGAAAAATTCAGCCAATCCCAAACCCTTATTACGGCCAGAATGTTGCGTGGAATTTGGCATCCGATCACTTTACGGGAGCAAAAGCGGTGGCGATGTGGGTTGCCCAGAAAAAGTACTACGACCATAAATCCAATTCGTGCATTGGTGGTGATTGTGAATTCTACACTCAGGTTGTTTGGAAAAACACTACTCATGTTGGGTGTGCTGCAGTTAAGTGCCAGAAATGCCAAATGAAATGCACCCTTGTTGTTTGTCTTTATAGTCCTCTAGGAAACATTGTTGGTGAACATCCTTACTAG 2334 0.3907 MLKIMLSFVPIHIFLWSLFCFFMIVYGAELGDINCLREINNSSDSSNQIWDFNFNINTIDLCSSFTGIECMTSGIDEEKVISIKLSNMGLEGQFPHCIENFSWLQNLNLSHNKLFGNIPPDISSKLPYLTSLDLSNNNFYGEIPKAIANLSYLNTLRLDGNQLNGTIPKELGFLPRITVFSVANNLLSGPVPVFVNNNVNVTLSYVNNNGLCGGTTLESCDEESLFGKPFWYSFVIAFVCSATSVIVTFMDYTQPWNEFKKSSRKSNTIYPLRKEQNNQKHTTNVAQLLPLALQEEGNKELCRLLERLIPRMSFMELCKATNYFSSNNIMGLGTTGIMYKAEVSNNCLIAVKRFYYSDKYKRQFLLETMIPGRHMHRNIASLLGFCIEKKERILVYSYISNGTLCHWLHNSQLEWPERIHIAIGIARGLSWLHKKCKIIHLNLSSECVLLDKNFEPKISNFGKAKFIMNQKNHARMRLFLVDEVIGVKGSFEKDIYDFGIILFELITGQKLSISSDSCSTNYDDDIGVDNSSLRSYISNRLFTDPSDFYYATDKCITGKGFDDKIHGLLEVACKCVKPSMEQRPKMDDVYRTITALWKGVATGRVFALPDPVPLNKNLHRTRPTSIRGVDGVEDSPKEYLKVHNDARASVGVPPLKWHVKLAKEAQKHLIKFIHNCLMGKIQPIPNPYYGQNVAWNLASDHFTGAKAVAMWVAQKKYYDHKSNSCIGGDCEFYTQVVWKNTTHVGCAAVKCQKCQMKCTLVVCLYSPLGNIVGEHPY* 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0428 777 Pfam Protein tyrosine and serine/threonine kinase 328 522 IPR001245 GO:0004672|GO:0006468
Ahy10g0428 777 PANTHER RECEPTOR-LIKE PROTEIN 55 8 596 - -
Ahy10g0428 777 SUPERFAMILY Protein kinase-like (PK-like) 303 596 IPR011009 -
Ahy10g0428 777 SMART SCP_3 634 773 IPR014044 -
Ahy10g0428 777 Gene3D Ribonuclease Inhibitor 33 222 IPR032675 -
Ahy10g0428 777 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 8 596 - -
Ahy10g0428 777 PRINTS Allergen V5/Tpx-1 family signature 707 720 IPR001283 -
Ahy10g0428 777 PRINTS Allergen V5/Tpx-1 family signature 760 773 IPR001283 -
Ahy10g0428 777 PRINTS Allergen V5/Tpx-1 family signature 655 673 IPR001283 -
Ahy10g0428 777 PRINTS Allergen V5/Tpx-1 family signature 730 746 IPR001283 -
Ahy10g0428 777 Gene3D Phosphorylase Kinase; domain 1 288 398 - -
Ahy10g0428 777 Pfam Cysteine-rich secretory protein family 640 765 IPR014044 -
Ahy10g0428 777 Pfam Leucine rich repeat 104 163 IPR001611 GO:0005515
Ahy10g0428 777 SUPERFAMILY PR-1-like 635 777 IPR035940 -
Ahy10g0428 777 ProSiteProfiles Protein kinase domain profile. 324 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy10g0428 777 SUPERFAMILY L domain-like 52 214 - -
Ahy10g0428 777 Gene3D Transferase(Phosphotransferase) domain 1 400 603 - -
Ahy10g0428 777 CDD CAP_PR-1 636 777 - -
Ahy10g0428 777 Gene3D CAP 632 777 IPR035940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0428 Ahy-Chr10 4156985 4183794 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0428 18 596 Receptor kinase-like Gene Family AT3G28450 31.271 1.10e-83 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Ahy10g0428 PK_Tyr_Ser-Thr 1.50E-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0428 - - ahf:112717205 1598.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy3g2955 3 126084010 126086084 Ahy10g0428 10 4156985 4183794 PCT
Ahy10g0428 10 4156985 4183794 Ahy3g2955 3 126084010 126086084 PCT