Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0427 ATGATCACCTGCATCATAGCACTCTCCAACCAAGTCCACCTTCAAAAGCAAGAACATATATTCTGTGCAGCTCTTTTTCAGTCTCTACTTTTCGAAGCATGTGGACGAACGGTTAACCCGGTTAACGGTGACGTTGGACTACTATGGACTGGAAACTGGCACATATGTCAGGCCGCCATTGAAACGGTGCTCCGAGGAGGCTCCCTCAGGCCTATGCCGGAGCTATTCGGTCTCAACGTGCCTGTTCCTGTTGCTGTTGACGCCGACTCCGAGAGAAAAGTCACGTGCACTGACGCGCGGAAGCTCCAAGACCCGAACCCGAGTCCGAGCATAAGGTTCACGAGCTCTCGATCTGGTAAAGACAGTTCCGGCTGGAAGCGGAAGCAATCAGAAGAGTGGGTCGCGGTGGGGAGGTGA 417 0.5348 MITCIIALSNQVHLQKQEHIFCAALFQSLLFEACGRTVNPVNGDVGLLWTGNWHICQAAIETVLRGGSLRPMPELFGLNVPVPVAVDADSERKVTCTDARKLQDPNPSPSIRFTSSRSGKDSSGWKRKQSEEWVAVGR* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0427 138 MobiDBLite consensus disorder prediction 101 120 - -
Ahy10g0427 138 PANTHER LOB DOMAIN-CONTAINING PROTEIN 24 108 - -
Ahy10g0427 138 MobiDBLite consensus disorder prediction 121 138 - -
Ahy10g0427 138 MobiDBLite consensus disorder prediction 96 138 - -
Ahy10g0427 138 Pfam Lateral organ boundaries (LOB) domain 23 62 IPR004883 -
Ahy10g0427 138 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 24 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0427 Ahy-Chr10 4142410 4142826 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0427 22 104 AS2 family AT3G49940 62.069 6.01e-30 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy10g0427 LOB 7.00E-06 No_clan