Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0415 ATGATCCAGTATGGTAAAGATTATGAATTTGATGCTCCAGTGAAGCTCCTAGAGAAACATCTACATGCTATGGCACAGTCTGTTGATGAGCAACTTCTTGTTGTTTCTCAGGTTATTGCTTTCAATGATAAGCCTGTGAAGAATTTGAAGGGCTTGACCACCATGGTTGAGAACTGTGATGATGAGTTTCTAAAGTTTGATCTGGAATACCAACAGATTAAATCAACTAAAAGAAATGAATTTGAGGATTATTTTTTGAAGCGAGAGTTGCTCATGGGAATATATGAGAAGGGTTTTGAAAGGCCTTCTCCTATCCAAGAAGAAAGCATTCCAATTGCTCTTATTGGTAGTGACATTCTTGCAAGGGCTAAAAATGGGACAGGCAAAACAGCTGCATTTTACATTCCTGCATCGGAAAAAATTGACCAGAAACAATCTATCCTGGCATAG 450 0.3822 MIQYGKDYEFDAPVKLLEKHLHAMAQSVDEQLLVVSQVIAFNDKPVKNLKGLTTMVENCDDEFLKFDLEYQQIKSTKRNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALIGSDILARAKNGTGKTAAFYIPASEKIDQKQSILA* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0415 149 Gene3D - 84 148 IPR027417 -
Ahy10g0415 149 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 74 143 IPR027417 -
Ahy10g0415 149 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 79 107 IPR014014 GO:0003724
Ahy10g0415 149 Pfam DEAD/DEAH box helicase 104 141 IPR011545 GO:0003676|GO:0005524
Ahy10g0415 149 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 6 71 146 - -
Ahy10g0415 149 Pfam PDZ domain 34 73 IPR041517 -
Ahy10g0415 149 Gene3D - 37 83 IPR046449 -
Ahy10g0415 149 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 71 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0415 Ahy-Chr10 4012856 4014467 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0415 81 142 Eukaryotic Initiation Factors Gene Family AT5G11200 46.774 3.12e-14 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0415 K12614 - ahf:112717194 295.819