Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0391 ATGGCTGAGGAGTTTCAAGCTACAATTTGTGGTGATAACTATTGGTGGAACTCAAACAAAAGCTTGTTCTCTTTGATGGGGGGATCAATGACGTGTTCTGTAGCAGCTGCTAACGATTCAGCAAATAATTATGACTCTTTCTGGCAAGGTTCTGATTTCATGGATTTCAAGGGAGCAACAACAAAATCTTCTTTCAAAGGAGAAGATACAAACAAGTGTAGTAATAATGAATCATCAACATCAGCATCAGTAGTAGCAGGTGGAACCGTTGGGAGTATCTTCATCAATTCCACCTCACAAATGATGAGTGATGGCTTCTCATCTTCACCATCATTCACTTGGAATAATCCTTCTCTATTCGGTTGTAATGAAAGGTCAGAAAACAATTTCCAATCTGTTGTGATTCAAGAAGAAACGGGATTAGATCCTTCTAATAATAACTCACAACAGATCCAGCAACAGCAAGAATTTTCGAATTCAATGGGTAGTGGATTTACAATTGAATCATCGTTATCTGCATCTTATGATTATCCGTTGATGCAAGCAGGACTATTTGGTTCGACTGACTCATCATCATCACTCTTCACAACTAACCAACCAACCCTTCCTGAACTGTCACCAATATGGTCTACGGTGTCTTCCTTTATGAAGCCTTCATCATTTATGGAGCCAAAGCAACTTAATGGATTGCAATTCTCAAATAATACTCCTTTCTGTAATGCTTCAACTGAAGAGACACTTTATAGTATAAGATCTGATATCTTTTCTTCGTCTTCTTCTCAACCACAGCTATATCAAACACCACCAACAACTTTTGATAATAGCAAACCCAATAATGCTCTAACTAGTACTCCACTCAACAAGTTGAAGAGGGAAGAATCTCCAGAAAAAGCATCGTCATCAGTCTGTAGCAAAAATGTTTCTGGGCGCGTCTTCAAAAAAACGAGAATCGAAACGCCATCTCCTTTGCCTACTTTTAAGGTTCGAAAAGAAAAGTTAGGGGACCGAATTACTGCTCTTCAGCAATTGGTATCACCTTTTGGAAAGACGGACACTGCATCGGTTCTACATGAAGCCATTGAGTACATCAAATTTCTTCATGATCAAGTCAATGTTTTAACAGCTCCATATATGAAAAATGGGTCTTCTATTCAAGATCAACAGGGATGTGATTATGAAAAGGATTCAAAATGTTTAACGCAAGATTTGAATAGTCGAGGGCTTTGTTTGGTACCAGTTGCAAGCACATTTCCGATGGCTACTGAGACCACTGCTGATTTTTGGACGCCTACATTTGGAAACTCACTCGTCGGGAATGTGGCAGTGGCAGGTAGTCATCAATGA 1344 0.3921 MAEEFQATICGDNYWWNSNKSLFSLMGGSMTCSVAAANDSANNYDSFWQGSDFMDFKGATTKSSFKGEDTNKCSNNESSTSASVVAGGTVGSIFINSTSQMMSDGFSSSPSFTWNNPSLFGCNERSENNFQSVVIQEETGLDPSNNNSQQIQQQQEFSNSMGSGFTIESSLSASYDYPLMQAGLFGSTDSSSSLFTTNQPTLPELSPIWSTVSSFMKPSSFMEPKQLNGLQFSNNTPFCNASTEETLYSIRSDIFSSSSSQPQLYQTPPTTFDNSKPNNALTSTPLNKLKREESPEKASSSVCSKNVSGRVFKKTRIETPSPLPTFKVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVNVLTAPYMKNGSSIQDQQGCDYEKDSKCLTQDLNSRGLCLVPVASTFPMATETTADFWTPTFGNSLVGNVAVAGSHQ* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0391 447 Gene3D - 327 388 IPR036638 GO:0046983
Ahy10g0391 447 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 41 422 - -
Ahy10g0391 447 PANTHER TRANSCRIPTION FACTOR BHLH103 41 422 - -
Ahy10g0391 447 MobiDBLite consensus disorder prediction 258 288 - -
Ahy10g0391 447 CDD bHLH_AtbHLH_like 323 373 IPR045239 -
Ahy10g0391 447 MobiDBLite consensus disorder prediction 258 300 - -
Ahy10g0391 447 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 317 366 IPR011598 GO:0046983
Ahy10g0391 447 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 327 379 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0391 Ahy-Chr10 3757090 3759662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0391 1 433 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 36.099 2.53e-53 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0391 - - adu:107468661 856.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0586 20 6248754 6251484 Ahy10g0391 10 3757090 3759662 hybridization
Ahy3g2968 3 126196051 126199059 Ahy10g0391 10 3757090 3759662 PCT
Ahy10g0391 10 3757090 3759662 Ahy3g2968 3 126196051 126199059 PCT