Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0375 ATGAGGAGAATCTTCTTCCCACACCTTAACTACCTCATTATCATTCTTATTAGCTTCTTCTTCATCACTCTATCGACCTCCTCGGATACTTTAACCGGAACACAAATCCTCACAACCAACCAAACCCTGTTGTCACAAAACCAAACCTTCGTGCTGGGCTTCTTCAGAGTTTCCGACACCAACTATTACCTTGGAATATGGTACAACAACATCAATCCTCAAACAATAGTTTGGGTTGCAAACAGAGACAACCCCATTGATAACTCCACAGGCTATCTTATGATTGGAGACAACGGAAACCTTGTCCTCCTCAATTCATCCGGGAACCCTGCATGGTCCTCCAACCAAACCAACGCCAAGAATCCAGTTCTCCAGCTCCTTGATACTGGTAACCTTGTTCTCAAAGATTCATCAGACAAGATCAGTAGTAGCTACTTATGGCAGAGCTTCGATTACCCAACAGATACCTTGTTACCGGAGATGAAGATCGGTTGGAACTTGGACACAGGAACGGAGAAGCACTTAACATCATGGAAAGTCAAAGGTGAAGACCCTTCAAGCGGTGACTACACTATGAAGGTAGATTACCATGGTTTACCTGAGATTCTCCTCAGCAAAAACCAAACAATAATATGCCGAAGTGGTCCTTGGAATGGTGAGAGATTCAGTGGGCACCCGGCGATGAAAGATAACACCTATGGTCTCAAGTTCAATTTCAATTATGATGTGCACAGTGTGTTTTTCTCTTTTTCCATTACAAAATCTTCCTTGTTGTCTAGAACAATTGTGACATCTGATTCTGATGGTGAGTTTCAACGCTACATGTGGATACAAGGAAGTTGGAACCAGTTCTGGTACCTACCAGCGGATCAATGCGATTACTATGGACAGTGTGGTCCGTATGGAGTGTGTGACAATGATGCTTCGCCAATTTGCACTTGTATGCAGGGGTTCAGGCCTAAGAACCAGGAAGCTTGGAACTTGAGAGATGGGTCTGATGGGTGTGTGAGGAACACGGGTTTGAATTGTTCGACTGACAAGTTCTTGCATCTTGAGAACATGAAGCTGCCGGAGACAAGCAGCGTGTTTATGAATAAGAGTATGACACTTGATGAATGTGGGAGTTTGTGTAAGAGGAATTGTTCATGCACTGCATATGCAAACATCTACATCACAAATGGAGGAAGTGGCTGTGTTATGTGGCTTGGCCAACTCTTTGACATGAGCGTCTACCGTACGGATGGTCAAGATCTCTATGTCAGATTGGCAGCTGCTGATATAGGATCTACTAGCTCCAACAAGAATCATAGAGTAGTACAGGCTGTTGGCATCACACTTAGCGCACTTGTTTTAGTTTTGGGATTGGTTGCTATTTGTTACCTAATGAAGAAGAGTAAACAAAGATCTAGAGGTTTTGTCCGCAGAAGTCATGATTGGATAATGAATGAGGTGGTGTTTTCTAGAAAACACTTACGTGATGAAAGGAACATGGATGATCTGGAATTGCCAATGTTTGATTTCGATACCTTAACAATGGCTACAAACAATTTCTCTCAAGATAATAAACTTGGAGAAGGAGGCTTCGGTAGAGTTTATAGAGGAAGATTGATTGAAGGCCAAGAAATTGCTGTGAAGAGATTATCAAAGAAATCTGGACAAGGAAACGAAGAGTTCAAGAATGAAGTCAAGTTAATTGTCAAGCTGCAACACCAAAATCTTGTTCGGTTGCTTGGTTGCTGCATTGAGAAGGATGAGAAGATGTTGGTGTATGAGTATTTGGAAAATAGAGGCCTTGATTCCATTTTATTTGGTAGTATTGTTTATTTCAATATTTTCTTCTTTCTGATTATGATCTATATTTGTTTTACTCTTATCCTTAGTTTATATGTATTAATAATAACTAATGTTGCAGACAAATCGAAAAGACCCTTGCTTGATTGGGAAAGACGTTTCAATATTATCTATGGGATAGCTAAAGGGCTTCTTTATTTGCATCAAGATTCGAGATATCGAATTATTCATAGAGATCTCAAGACAAGTAACATATTATTAGATAATGAAATGAATCCAAAAATATCAGACTTTGGAATCGCTAGAATTTTTGACAAAAATCAAATGCAAGCAAAAACATTAAGAATTGTTGGAACATATGGTTATATGTCTCCTGAATATGCTATGGACGGAAACTTCTCAATAAAATCTGATGTTTTTAGCTTTGGAGTTATGGTATTGGAGATTATAACTGGAAAAAAGAATAGAGAGTTTTACAGTGATAACAATGAATTAAATCTTCTAGGAAATGTATGGAGGCATTGGCATGAAGGAACTGCACTGACACTAATTGATCCATCCATTGGCAATTCATACGCAGAATCTAAAGTTATGAGATGCATACATATTAGTCTCTTATGTGTACAAGAACGTGCAGAAGATAGACCAACAATGTCTTCAGTGATCTTAATGTTGAGTAGTGAAGCTCCATCAATGCCAAAACCTAAAATTCCTGGATTTTCCGCAAGGACAAATTATCCAGAGATTGATTCATCTTCAAACAAGCAAAATGATATCTGGAGTGTGAATCAAGTCACAATCACAATGTTAGATGCTAGGTAG 2613 0.3923 MRRIFFPHLNYLIIILISFFFITLSTSSDTLTGTQILTTNQTLLSQNQTFVLGFFRVSDTNYYLGIWYNNINPQTIVWVANRDNPIDNSTGYLMIGDNGNLVLLNSSGNPAWSSNQTNAKNPVLQLLDTGNLVLKDSSDKISSSYLWQSFDYPTDTLLPEMKIGWNLDTGTEKHLTSWKVKGEDPSSGDYTMKVDYHGLPEILLSKNQTIICRSGPWNGERFSGHPAMKDNTYGLKFNFNYDVHSVFFSFSITKSSLLSRTIVTSDSDGEFQRYMWIQGSWNQFWYLPADQCDYYGQCGPYGVCDNDASPICTCMQGFRPKNQEAWNLRDGSDGCVRNTGLNCSTDKFLHLENMKLPETSSVFMNKSMTLDECGSLCKRNCSCTAYANIYITNGGSGCVMWLGQLFDMSVYRTDGQDLYVRLAAADIGSTSSNKNHRVVQAVGITLSALVLVLGLVAICYLMKKSKQRSRGFVRRSHDWIMNEVVFSRKHLRDERNMDDLELPMFDFDTLTMATNNFSQDNKLGEGGFGRVYRGRLIEGQEIAVKRLSKKSGQGNEEFKNEVKLIVKLQHQNLVRLLGCCIEKDEKMLVYEYLENRGLDSILFGSIVYFNIFFFLIMIYICFTLILSLYVLIITNVADKSKRPLLDWERRFNIIYGIAKGLLYLHQDSRYRIIHRDLKTSNILLDNEMNPKISDFGIARIFDKNQMQAKTLRIVGTYGYMSPEYAMDGNFSIKSDVFSFGVMVLEIITGKKNREFYSDNNELNLLGNVWRHWHEGTALTLIDPSIGNSYAESKVMRCIHISLLCVQERAEDRPTMSSVILMLSSEAPSMPKPKIPGFSARTNYPEIDSSSNKQNDIWSVNQVTITMLDAR* 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0375 870 Gene3D - 23 150 IPR036426 -
Ahy10g0375 870 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 12 869 - -
Ahy10g0375 870 Gene3D Hepatocyte Growth Factor 341 423 - -
Ahy10g0375 870 ProSiteProfiles EGF-like domain profile. 288 324 IPR000742 -
Ahy10g0375 870 CDD B_lectin 34 153 IPR001480 -
Ahy10g0375 870 Pfam PAN-like domain 343 408 IPR003609 -
Ahy10g0375 870 Gene3D Phosphorylase Kinase; domain 1 491 592 - -
Ahy10g0375 870 PIRSF SRK 1 607 IPR024171 GO:0004674
Ahy10g0375 870 PIRSF SRK 633 870 IPR024171 GO:0004674
Ahy10g0375 870 ProSitePatterns Serine/Threonine protein kinases active-site signature. 672 684 IPR008271 GO:0004672|GO:0006468
Ahy10g0375 870 SMART serkin_6 517 829 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy10g0375 870 Pfam S-locus glycoprotein domain 213 322 IPR000858 GO:0048544
Ahy10g0375 870 SUPERFAMILY Protein kinase-like (PK-like) 502 843 IPR011009 -
Ahy10g0375 870 Pfam D-mannose binding lectin 75 179 IPR001480 -
Ahy10g0375 870 CDD EGF_CA 290 322 - -
Ahy10g0375 870 SMART blect_4 34 153 IPR001480 -
Ahy10g0375 870 Pfam Domain of unknown function (DUF3403) 824 870 IPR021820 GO:0004674
Ahy10g0375 870 ProSiteProfiles Protein kinase domain profile. 517 829 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy10g0375 870 CDD PAN_AP_plant 341 423 - -
Ahy10g0375 870 SUPERFAMILY alpha-D-mannose-specific plant lectins 61 218 IPR036426 -
Ahy10g0375 870 PANTHER - 12 869 - -
Ahy10g0375 870 Gene3D Transferase(Phosphotransferase) domain 1 628 831 - -
Ahy10g0375 870 Pfam Receptor serine/threonine kinase 474 507 IPR022126 GO:0004674
Ahy10g0375 870 ProSiteProfiles PAN/Apple domain profile. 343 423 IPR003609 -
Ahy10g0375 870 ProSitePatterns Protein kinases ATP-binding region signature. 523 545 IPR017441 GO:0005524
Ahy10g0375 870 ProSiteProfiles Bulb-type lectin domain profile. 28 147 IPR001480 -
Ahy10g0375 870 Pfam Protein tyrosine and serine/threonine kinase 519 819 IPR001245 GO:0004672|GO:0006468
Ahy10g0375 870 SMART ntp_6 343 422 IPR003609 -
Ahy10g0375 870 CDD STKc_IRAK 523 822 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0375 Ahy-Chr10 3470237 3475052 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0375 452 870 Receptor kinase-like Gene Family AT4G21400 49.645 5.58e-124 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy10g0375 PK_Tyr_Ser-Thr 3.40E-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0375 - - aip:107621495 1288.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0573 20 6047464 6050919 Ahy10g0375 10 3470237 3475052 hybridization
Ahy3g2973 3 126347703 126351685 Ahy10g0375 10 3470237 3475052 PCT