Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0363 ATGAGGAAGAAGTGTGAGCTGTGTAACTGTGCTGCAAACTTGTTCTGTGATTCAGATCAAGCAAGCCTTTGTTGGGAATGTGATGCAAAGGTTCACAGTGCAAACTTTCTGGTCACAAAGCATCCAAGGATTCTTCTATGCCATGTTTGTCAATCACTAACACCTTGGCATGGTTCAGGTCCCAAGTTTGTTCCCACCATGTCACTTTGCACTGATTGTGTCACCAAAAACAATGATACCTGCAACCACCAGAATGATGATGATGTAGAAAATGATGGTGTTGATGGTGGTGAGGATGAAGATGAAGATGAAGATGAAGAAGAAGAAGAAGAAGAAGAAGAAAATCAAGTGGTTCCATGGACATCATCAACATCAATGCCTCCACCACCAGTTTCCTCTTCTTCAAATAGTGCAACCACTACTTCCACCAGGTTCTCTAATGGTGCTGAAGAAGAAGCAATCTCCAACTGA 471 0.4246 MRKKCELCNCAANLFCDSDQASLCWECDAKVHSANFLVTKHPRILLCHVCQSLTPWHGSGPKFVPTMSLCTDCVTKNNDTCNHQNDDDVENDGVDGGEDEDEDEDEEEEEEEEENQVVPWTSSTSMPPPPVSSSSNSATTTSTRFSNGAEEEAISN* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0363 156 MobiDBLite consensus disorder prediction 91 116 - -
Ahy10g0363 156 CDD Bbox1_BBX-like 4 46 - -
Ahy10g0363 156 PANTHER B-BOX TYPE ZINC FINGER PROTEIN 3 150 - -
Ahy10g0363 156 MobiDBLite consensus disorder prediction 117 156 - -
Ahy10g0363 156 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 3 150 - -
Ahy10g0363 156 SMART bboxneu5 1 46 IPR000315 GO:0008270
Ahy10g0363 156 MobiDBLite consensus disorder prediction 78 156 - -
Ahy10g0363 156 Pfam B-box zinc finger 3 44 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0363 Ahy-Chr10 3323955 3325070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0363 1 128 C2C2-CO-like Transcription Factor Family AT4G27310 39.024 6.16e-35 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Ahy10g0363 zf-B_box 1.90E-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0363 - - gmx:100805832 160.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0552 20 5747071 5747986 Ahy10g0363 10 3323955 3325070 hybridization