Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0356 ATGGGAAAAAAACGGAATAAGGTGGAAGAAGCTCTGCCGGACAACCTGCGGTGCAGCCGCACCGACGGTCGGCAATGGCGGTGCCGGCGGCGCGTGATGGACAACCTCAAACTCTGCGAGCTTCACTACCTTCAAGGGCGCCACCGCCAGTACAAGCAGAAGGTTCCGGAGTCACTGAAGCTTCAGAGAACAACGAGCACCAAGACGGAGGGGCAAAACAGCACCACTTCCCAAAACGACCCCGTTTTGAAGAGCACTGAAATTAGGGCGAGGATTTCAAAGTTGATGATGCTCAGGAGGAAGAAGAGGAAATTATCCGGGGGTTCAGAGGGTGGTCCGATTAAGAGGAAGAGTAAGAAGAAGAAGAAGAAGGAGAAGCGTGATGCGCATTTGGAACTGCTAAGGATGGTTCTGCAGAGAGAGGTTGAGAAGAGCAAAGGGAAGAAGAAGGATCAGAGTGAGAATGGGAATGTGGAGGAGGATTTGGAGCTGCACCATTACTATGATGAGGGTGAGCTCAGGAGGGAATTGCCCAATGGTGTTATGGAGATTGCTCCTGCTGCTTCAACCCCACATGATTACACCAATGTGGGTTCCCATTTTGATGTCAAAGTTGGAATCTTTGATCATGGCAGAGCTCTTACACCCCGTTACTTCAGGTCCAAGAATGTTGAGAGAGACCCTGTTGGCAAGTTGCAGGTTGTGCCTTATGGAGTGAACTTGAAGAAGGGTAAGAGGAAGAAGTGCCATTGGTGCCAGAGAAGTGATTCCTGGAATCTGATAAAGTGTTCTCGCTGCCAGAAAGAGTTTTTCTGCATGAATTGCATTAAAGAAAGGTATTTTGACACCCAAAATGAAGTTAAGATGGCATGTCCAGTGTGTAGAGGAACTTGCACTTGTAAAGATTGCTTGGCTATTCAACGTAAAGACAGAGAAAGTAAGGAATATTTAGCTGGTAGAAGCAGAGTTGATAGAATATTGCATTTTCATTATTCAATCTGTATGCTGCTTCCTGTACTGAAACAAATAAGTGAAGATCAGCATATTGAGCTGGAAACAGAAGCGAAAATCAAAGGGAAAACAATCACTGATATTCTCGTCAAGCAGGTTGAATTCGGCCGCAATGAGAAGAATTACTGCAATCACTGCAAAACACCCATCCTGGATCTTCATAGAAGCTGCCTTAGTTGTTCCTATAGCCTTTGCTTAAGTTGTTGTCAGGAATTAAGACAAGGAAGAACTTCTGAAGAAGTTAGCTCTTATTTGTCCAAGCTACCTGATGAAATACACAGTTGTACTGCTGGTGAAAACCACCTTTTGGATGATAAGGCCATTTTACACGAAAACTCAACTGGCTCTTCAACATTGCCTGAATCGTCAGGGTTTGATGGTACCTATGGTGTGTCATGTCCATCTACAGAGTTAGGTGGTTGTGGCGATAGCCATCTTGATTTGAGATGTCTTTTTCCCTTAAGCTGGATTAAAGAGATGGAAGTAATGGCAGACGAAATAGTTTGCAGTTATGAATTTCCTGAAATTTTGGATAAAAGTTCATCCTGCTTACTGTGTATTGACAGAGATCAGCAGCTGCAAAAGGCAGCTCAAAGAGAAGATTCTAATGATAATTGTTTGTTTTATCCTACGATTTTGGACATTACTAGTGATCATTTTGAACACTTTCAGAAACACTGGGGGAAGGGCCATCCTGTAATAGTGCAAGATGCACTCAAGAGTACTTCAAACCTCAGTTGGGATCCACTCATCTTGTTCTGTGCTTATCTTGAGAGGAGCATTACAAGATATGAGAATAATAAGGACTTACTTGAAGCTTGTTTGGATTGGTGTGAGGTGGAAATCAACATTAGGCAGTATTTTACTGGGTCCCTTAAAAGTCAGCCCCAGAGGAATGCTTGGCATGAGATGTTGAAAATAAAAGGCTGGTTGTCTTCCCAGCTATTCAAAGAAGAGTTTCCAGCTCATTTTGCTGCAATAATTGATGCCATACCAATTCAAGAATACATGAATCCCATGTCTGGTTTCCTTAACATGGCTGTAAATTTGCCACAGGGGACTACAAAACATGACATGGGACCGTATATCTATATCTCATACGGCTGCGCTGATGAAGAAACTGATTCTGTGACCAAACTATGTTACGACTCATATGATTTGGTTAACATTATGGCACATACCACAGATGTCCCTCTGTCTGCAGAACACCTTACTAAAATACGCAGATTATTGAAAAAGCACAAAGCTTTATGTCGAAGGGAGTCTTCCAAAATTACTGCTGAGCATGCTGAAGACACAGAACAAAATGGACATCAAGGTGTGGTAAGAGAAGGGATGGACTTTTTCAGGAGAGTCAATAGAATATCTTCTATCCCCACTGAAGCCAGAACGAAAACTAATCACAGTTTAGACACCGATACCTCTGGGAGTGGAGAATGTGATTTAGTTTCTGATGCTGGAAAAGCGCAAAGTTCTTCACCTATCCACAAGACAGTTAAAAGCACTGAAATGTCTCCAGACCATGATAATACTAGAAGAACCTTAGAAAATCCGAACGGTGATAAAAGCAAGTTTACTGAGGATTCGGGTGCTCAGTGGGATGTCTTTCGGAGAGAAGATGTACCAAAGCTCTTGGAATACCTCAAAAGGCATCATGATGAATTTTCTTATAGCCATGAATACCAAGAGGAGATGGTTCATCCAATTCTTGATCAGAGCTTCTATCTCAACAATTTTCACAAAATGAGACTTAAGGAGGAATTTGAAATTGAACCATGGACATTTGAGCAACATGTTGGAGAAGCTGTTATCATTCCTACTGGATGTCCATACCAAATTCGGAATCCTAAGTGTTCTGTTCATGTGGTATTGGAGTTTGTTTCCCCTGAGAACGTTTCTGAAAGCATCCAATTGATCGATGAGGTTCGTCTGCTTCCAAAAGACCATATAGCAAAAGTAGACAAGCTTGAGGTGAAGAAGATGGCTCTCTATAGCATGAATACAGCAATTAAAGAAATACGTGACTTTACAAGCAAAGCTTGA 3054 0.4244 MGKKRNKVEEALPDNLRCSRTDGRQWRCRRRVMDNLKLCELHYLQGRHRQYKQKVPESLKLQRTTSTKTEGQNSTTSQNDPVLKSTEIRARISKLMMLRRKKRKLSGGSEGGPIKRKSKKKKKKEKRDAHLELLRMVLQREVEKSKGKKKDQSENGNVEEDLELHHYYDEGELRRELPNGVMEIAPAASTPHDYTNVGSHFDVKVGIFDHGRALTPRYFRSKNVERDPVGKLQVVPYGVNLKKGKRKKCHWCQRSDSWNLIKCSRCQKEFFCMNCIKERYFDTQNEVKMACPVCRGTCTCKDCLAIQRKDRESKEYLAGRSRVDRILHFHYSICMLLPVLKQISEDQHIELETEAKIKGKTITDILVKQVEFGRNEKNYCNHCKTPILDLHRSCLSCSYSLCLSCCQELRQGRTSEEVSSYLSKLPDEIHSCTAGENHLLDDKAILHENSTGSSTLPESSGFDGTYGVSCPSTELGGCGDSHLDLRCLFPLSWIKEMEVMADEIVCSYEFPEILDKSSSCLLCIDRDQQLQKAAQREDSNDNCLFYPTILDITSDHFEHFQKHWGKGHPVIVQDALKSTSNLSWDPLILFCAYLERSITRYENNKDLLEACLDWCEVEINIRQYFTGSLKSQPQRNAWHEMLKIKGWLSSQLFKEEFPAHFAAIIDAIPIQEYMNPMSGFLNMAVNLPQGTTKHDMGPYIYISYGCADEETDSVTKLCYDSYDLVNIMAHTTDVPLSAEHLTKIRRLLKKHKALCRRESSKITAEHAEDTEQNGHQGVVREGMDFFRRVNRISSIPTEARTKTNHSLDTDTSGSGECDLVSDAGKAQSSSPIHKTVKSTEMSPDHDNTRRTLENPNGDKSKFTEDSGAQWDVFRREDVPKLLEYLKRHHDEFSYSHEYQEEMVHPILDQSFYLNNFHKMRLKEEFEIEPWTFEQHVGEAVIIPTGCPYQIRNPKCSVHVVLEFVSPENVSESIQLIDEVRLLPKDHIAKVDKLEVKKMALYSMNTAIKEIRDFTSKA* 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0356 1017 MobiDBLite consensus disorder prediction 127 162 - -
Ahy10g0356 1017 ProSiteProfiles WRC domain profile. 12 58 IPR014977 -
Ahy10g0356 1017 PANTHER PROTEIN B160 9 1015 - -
Ahy10g0356 1017 SUPERFAMILY Clavaminate synthase-like 556 1000 - -
Ahy10g0356 1017 ProSiteProfiles Zinc finger RING-type profile. 249 295 IPR001841 -
Ahy10g0356 1017 Pfam JmjC domain, hydroxylase 867 959 IPR003347 -
Ahy10g0356 1017 MobiDBLite consensus disorder prediction 796 864 - -
Ahy10g0356 1017 Pfam WRC 13 54 IPR014977 -
Ahy10g0356 1017 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 9 1015 IPR045109 GO:0032454|GO:0033169
Ahy10g0356 1017 MobiDBLite consensus disorder prediction 57 84 - -
Ahy10g0356 1017 Gene3D Cupin 548 989 - -
Ahy10g0356 1017 MobiDBLite consensus disorder prediction 50 162 - -
Ahy10g0356 1017 MobiDBLite consensus disorder prediction 838 864 - -
Ahy10g0356 1017 MobiDBLite consensus disorder prediction 823 837 - -
Ahy10g0356 1017 ProSiteProfiles JmjC domain profile. 676 980 IPR003347 -
Ahy10g0356 1017 MobiDBLite consensus disorder prediction 796 816 - -
Ahy10g0356 1017 SMART cupin_9 657 980 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0356 Ahy-Chr10 3271400 3277676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0356 13 116 GRF Transcription Factor Family AT4G37740 32.075 1.20e-06 50.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Ahy10g0356 JmjC 7.40E-09 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0356 K15601 - gmx:100810673 1332.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0545 20 5692388 5698384 Ahy10g0356 10 3271400 3277676 hybridization
Ahy3g2979 3 126430021 126435214 Ahy10g0356 10 3271400 3277676 PCT
Ahy10g0356 10 3271400 3277676 Ahy3g2979 3 126430021 126435214 PCT