Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0353 ATGGGAAGAGCACCTTGTTGTGACAAAAATGGCCTCAAGAAAGGGCCATGGACTCCCGAGGAGGATCAAAAACTTATTGATTATATTCAAAAACATGGATATGGAAACTGGAGGACTCTCCCAAAGAATGCTGGGTTGCAAAGATGTGGAAAGAGTTGCCGTCTACGGTGGACAAACTATCTCCGGCCAGATATCAAGCGTGGTCGGTTCTCATTTGAAGAGGAAGAGACAATCATTCAACTACATAGCATTCTTGGCAACAAGTGGTCTGCGATTGCTTCTCGGCTACCAGGAAGAACGGATAATGAAATAAAGAATTACTGGAACACTCACATAAGGAAGAGGCTTCTGAGAATGGGAATTGATCCTGTGACACACAGTCCAAGACTTGATCTCTTGGATCTCACTTCCATTCTAAGCTCTTCTCTCTATGGAGATAATAATAATTCTTCACCAATCAACATCCAAAGGCTCCTTACCATGCACCCTATGGTGAACCCGCAGCTTCTCAAGTTAGCTTCCTCTATCATCTCTTCTCAACAACATGATGAAAGCCTTGACTTCACTTCTTATCATAATAATCATTATGATAACCCTCAAATTCAGAACCAGAACCAGATCCAGAACCAAACAGAACAAGAACAACACTTTGTTCAAACTCATCAAGAGCCGGTGACTTGTGTCTCATTGCCACGTTTCATTGAACCAAACAATAATAACAATGTGAACGCATACCCGTTCAATGGAATTGATTTAAGTTCCTTAACAGAAGAAGATTATATCGTCCCTCAATTATCGAGCTATGATTATTATAGTTCTGATAATAATAATCTTCTAGTGGGTCCTTCATCATTGTCAGAAGCTTCAACAACCTTCCATTCAAGCCCCACAACGTTGAATTCGAACATCAATGGTAGCAGCAGCACCGAGGATGAGAGTAGTAGTGACAACATGTTGAGATTTCAAATCCCAGATGTTTTGGATGTCACTCAGTTTTGTGATGATAATAATGTTGTTTCAGATTATTATTATTATTAG 1038 0.4008 MGRAPCCDKNGLKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSILGNKWSAIASRLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHSPRLDLLDLTSILSSSLYGDNNNSSPINIQRLLTMHPMVNPQLLKLASSIISSQQHDESLDFTSYHNNHYDNPQIQNQNQIQNQTEQEQHFVQTHQEPVTCVSLPRFIEPNNNNNVNAYPFNGIDLSSLTEEDYIVPQLSSYDYYSSDNNNLLVGPSSLSEASTTFHSSPTTLNSNINGSSSTEDESSSDNMLRFQIPDVLDVTQFCDDNNVVSDYYYY* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0353 345 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Ahy10g0353 345 CDD SANT 69 112 IPR001005 -
Ahy10g0353 345 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Ahy10g0353 345 CDD SANT 16 61 IPR001005 -
Ahy10g0353 345 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 328 - -
Ahy10g0353 345 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Ahy10g0353 345 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Ahy10g0353 345 SMART sant 66 114 IPR001005 -
Ahy10g0353 345 SMART sant 13 63 IPR001005 -
Ahy10g0353 345 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Ahy10g0353 345 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Ahy10g0353 345 Gene3D - 69 116 - -
Ahy10g0353 345 PANTHER PROTEIN ODORANT1-LIKE 1 328 - -
Ahy10g0353 345 MobiDBLite consensus disorder prediction 291 316 - -
Ahy10g0353 345 Gene3D - 13 66 - -
Ahy10g0353 345 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0353 Ahy-Chr10 3252785 3254284 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0353 1 332 MYB Transcription Factor Family AT4G21440 55.000 1.38e-115 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy10g0353 Myb_DNA-binding 1.60E-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0353 K09422 - gmx:102660551 388.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0542 20 5651363 5652913 Ahy10g0353 10 3252785 3254284 hybridization