Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0350 ATGGGCTACGATGAACAACTCAAACCGTGCCGGAATAACTTGCCGGAATCCTCCAATCCCCGGCGAGTCGTCAACCTTATTTCATCCCTAATCTCCCTCTCCCTCTCGATTAGGGTCTTCGCCGGAAAATGGCAACTGATTCGCAACAAGCTCGAGGAGCTGTACTCCGGTCTAGTCGGAGCCGACGACGACCCTTCACTCTCCGGCGTTCTCCCTGCGATCCTCTCCACCGCGGAGGAGTGTTCCGACCTAGCTCGCCGCTGCACCGATCTGACATACAGCGGGAAGCTTCTTATGCAGAGCGACTTAGAGGTGGTTTTCGCGAAGCTCCATTGCCATGTGAAGAAGCTGTCTGAGATGTACACGAAGGGTGTTCTCACACACAGCTACGCTCTGGTGGTCTCGAAGCCTGGACTTGGAGCTTCCAAAGAGGACATGAGGTTCTTCGTGAGGGACCTACTCACCAGAATGAAGGTTGGCGATGTTAGTATGAAGAAGCAGGCATTGATCAACCTCCACGAAGTTGCTTCCGAAGACGACAAGTACGTGAAGGTGATTGTTGAAGTCGGTGACGTTGTTCATGTTCTGGTTGATTTTCTAGGGTCCTCTGAGTTGGAGATTCAACAAGAGTCTGCAAAGGTAGTTTCTTTGATTGCGAGGTTTGATTCTTATAAAGGAGTTCTTGTTGGCGCTGGCGTTGTTGCGCCTTTGGTTAAGGTTTTGGAGTGTTCAAGTGAGACTGGCAAAGTTGCTGCTGCCTTGTGTCTGCAGAGTTTGACTGAGAATTCCGATAATGCTTGGTCGGTTTCCGCTCACGGCGGCGTCACGGCGTTGTTGAAGATTTGTGGCGGTGTAGATTGCAGAGCAGAATTGGTTTGTCCTGCTTGTGGAGTTCTGAGGAATCTGGTTGGTGTTGAAGAGATTAAGAGGTTCATGGTTGATGAAGGTGCGGTTTCAAGCTTCATTAGGCTTATGAGGTCAAGGGACGAAGCGATTCAGGTGAGTTCCATTGAGTTTCTTCAGAGTATTGCATCCGGAGATGAGTCATTGGTTAAGCAGATTGTTGTTAGAGAAGGCGGGGTTCGTGTTTTGCTGCGACTTTTGGATCCTAAATGGCCTTGTTCTTCCAAAACAAGAGAGGTAGTGATGAGGGTTATTGAGAATTTGTTCTTCTCTTGGTCTAGTTGTGTCACTATTTTGATGAGCTATGGTTTTGTGGATCAATTGATGTACTATATTCGAAACGGCGACGTTTCTGTTCAAGAATTGGCTCTCAAAGTTGCGTTTAGATTGTGTGGAACATGTGAAGATGCTAAGAAAGCTCTAGGTGATGCTGGATTCATGGCAGATCTTGTTAAGTTTCTAAATGTGAAATCATTCGAGGTTCGAGAAATGGCGGCCGAGGCACTCTCCGGGATGGTTATGGTTGCCAAGAACAGGAAGAGGTTTGTGCAAGATGATGAAAGCATTGCTCTTCTTCTGCAGTTGTTGGATCCAGAGGAGGGGAATTCAGGTAACAACAAGTTCTTGATCTCTGTATTGATGTCATTGACGCATTGCAACAGTGGGAGGAAGAAGATTGTGAGTTCTGGGTATGCTAAGAACATAGAGAGGCTTGCATCAGAATCTCAAGTTTCTTCTGCTGAAGCAAAGAGACTTGTCAGGAAGCTATCCACCAATACATTCCGCACCTTGCTCAGTGGAATCTGGCACCACCACCACTCTTGA 1728 0.4763 MGYDEQLKPCRNNLPESSNPRRVVNLISSLISLSLSIRVFAGKWQLIRNKLEELYSGLVGADDDPSLSGVLPAILSTAEECSDLARRCTDLTYSGKLLMQSDLEVVFAKLHCHVKKLSEMYTKGVLTHSYALVVSKPGLGASKEDMRFFVRDLLTRMKVGDVSMKKQALINLHEVASEDDKYVKVIVEVGDVVHVLVDFLGSSELEIQQESAKVVSLIARFDSYKGVLVGAGVVAPLVKVLECSSETGKVAAALCLQSLTENSDNAWSVSAHGGVTALLKICGGVDCRAELVCPACGVLRNLVGVEEIKRFMVDEGAVSSFIRLMRSRDEAIQVSSIEFLQSIASGDESLVKQIVVREGGVRVLLRLLDPKWPCSSKTREVVMRVIENLFFSWSSCVTILMSYGFVDQLMYYIRNGDVSVQELALKVAFRLCGTCEDAKKALGDAGFMADLVKFLNVKSFEVREMAAEALSGMVMVAKNRKRFVQDDESIALLLQLLDPEEGNSGNNKFLISVLMSLTHCNSGRKKIVSSGYAKNIERLASESQVSSAEAKRLVRKLSTNTFRTLLSGIWHHHHS* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0350 575 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 13 571 - -
Ahy10g0350 575 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 316 360 IPR000225 GO:0005515
Ahy10g0350 575 SMART arm_5 221 261 IPR000225 GO:0005515
Ahy10g0350 575 SMART arm_5 305 345 IPR000225 GO:0005515
Ahy10g0350 575 SMART arm_5 347 391 IPR000225 GO:0005515
Ahy10g0350 575 SMART arm_5 179 220 IPR000225 GO:0005515
Ahy10g0350 575 SMART arm_5 262 304 IPR000225 GO:0005515
Ahy10g0350 575 SMART arm_5 435 475 IPR000225 GO:0005515
Ahy10g0350 575 SUPERFAMILY ARM repeat 143 542 IPR016024 -
Ahy10g0350 575 Gene3D - 149 563 IPR011989 -
Ahy10g0350 575 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 273 317 IPR000225 GO:0005515
Ahy10g0350 575 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 13 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0350 Ahy-Chr10 3236338 3238667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0350 150 369 U-box Gene Family AT2G23140 26.339 2.13e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0350 - - gmx:100783537 783.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0538 20 5611051 5613436 Ahy10g0350 10 3236338 3238667 hybridization
Ahy3g2985 3 126528688 126530831 Ahy10g0350 10 3236338 3238667 PCT
Ahy10g0350 10 3236338 3238667 Ahy3g2985 3 126528688 126530831 PCT