Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0304 ATGGAAGATAAGTTTTTCTCTGAGGGAGAGGGAATTGGGTATTGGACACCTCCTGGCGCTCAATTCGATGGACCAAGCATGATAGACAACGGAATAAAAAATCTTGTATCAGAGGAGATGCTTGACAACCTCCCTGATCTCATGAACTTCGATAACCTTGCTGGTTGGGGTAATATTCCATCTGTGACTGATCATAATTTAGATAATGGAATTTCATCACTTGCCTCTATGCCGTATTCTCCACCTGATGCATTCAGTTTAGTGGAACAGGACAATGATCCATACTTTATGACAAAAGATTGTGGAAATTATAATGCTATTGAAACCTCCTTGGGTTTCGATGAGAAGGCTGTGTTACAGCAATTGGAGACCCAACTTGGGTTGTCAGAAGATGCAAATGATATGAATAACATAAATGAATCACTTCAAGAATTGAGTGCTGCTGACATGGGAAATTGCTTGGTGCCTAGACCATTTGCTTGGTCGCTTAATGAGAGAATGCTGAGGGCTATGGACTTGTTTAAGGAATTAGTTGGTGATGGAATATTGACACAAGTTTGGGCACCAATGAGGCATGGTAATGACTTCATCTTAAGCACAAGTGAGCAACCCTATTTGCTAGATCACATGCTAGCTGGATATCGAGACGTGTCGAGGGAATTTACCTTTTCTGCTGAAGATAAACCAGGGTCTTTTCCAGGGCTTCCCGGACGTGTGTTTATCTCCCAAATTCCTGAATGGACCTCCAATGTTGGGTACTACAATAAAAGTGAGTTCCTGAGGGTGGAGCATGCAATTCATCACGAGGTTCGTGGATCAATTGCGGTTCCCATAATTGATACGCTCGCTGAACCACCTTGTTGTGCTGTACTAGAACTTGTCACTACAAAGGAAAAGCCTGATTTTGACAAAGAACTAGAAATTGTTAGCAGTGCACTCCAGCTTGTTAATTTAAGGACTACTACGCCTCCAAGAATTATGTCCCAGTGTCTATCAAATAACAAAAGAGCAGCTTTAACAGAGATAATTGATGTGTTGCGAGCTTTGTGTCATGCGTATAGTTTGCCACTGGCATTGACATGGATCCCCTGTTGTTATACTGAGGGAGTAGGAGATGAAGCTTCAAGAATACGGATTAAAGATGGCGGTAGAATTCCTGGTGAAAAAACTGTACTATGCATTGAAGAATCAGCTTGCTATATAAATGATATTGTGGTAGGAGGATTTGTTCATGCATGTGTTGAACATTATCTCGAGGAAGGGCAAGGTGTAGCTGGGAAAGCTCTTCAATCAAATCGACCATTCTTCTATTCCGATGTGAAGGCCTATAATATTAGTGCATATCCCCTTGTTCACCATGCGCGAAAATATAAGTTGAATGCTGCCGTTGCAGTCAGGCTAAGGAGTATTCATACCAATGATGATGATTACATAATAGAATTCTTTCTACCTGTCAATATGAATGGAAGTGAAGAACAGCAACTTTTATTAAACAATCTATCAGATACTATGCAGAGAATGTGTCAGAGTTTGAGGACAGTTTCGGATGCTGAATTATACGGGATAGAAGGTTCGCAAGTGCAGTTTTCAAAGGAAGAAGGCTCTCATATGGCACCGGATGGTGACCATGATTCGGTCCAGCCTATGTCATTGACAAACAATGAAACTGAAGCTGCTCATAACCAGGCAATGGATGGATCAAGAAAGCAGATTGAGAAAAAGAAAAGTCCAGCGGAGAAGAATATTAGCTTGAGTGTTCTCCAGCAATATTTCTCCGGTAGTCTTAAAGATGCGGCTAAAAGCCTTGGTGTTTGCCCAACAACCCTGAAAAAGATATGCAGGCAACACGGAATTTCAAGATGGCCATCGCGCAAGATCAATAAAGTTAATCGTTCGTTAAAAAAAATACAAACCGTGCTTGACTCAGTCAAGGGTGTGGAAGGAGGACTGAAGTTTGATCCTTACAAGGGGGGATTTATGTCGGGAGGATCAAGCAACCAAGAAATTAATGCACATAAAAGTTCTCTCTTCCGGAAGAAATCTTCTGTAAAATATCCTGATCCTGCAGCTGGTAGCAAAGATTCAAAGCCAATAGCCATGGATGATGGTGGATTACGGCAGGAACCCTTTCCGGTTTCTATTTTGGAAAGTTCTTGGTGTGATATAGCATATCACAGTCCAAACACCCTGGTTGCCGATGAGATGGCTGACAAGCTCGGCGAGCATCACAATCCCACTACTTCAAGCATGTCAGACTCGTCGAATGGCTCTGGCTCAATTTTGCGTGGCTCTCGGAAATTTGAGAATCGGAAACATTTGAAAGCCAAATCACCTTGTGTTGATAATGGATCAAAACTTGTTGTCAAAGCTGCCTACGGAGAAGATATGATCCGTTTCAAGTTTGATCCTGCAGCTGGCTGTCTCCAGCTCTATGAAGAAGTTGCAACAAGATTCAAATTACAAATCGGATCTTTCCAGCTCAAGTATCTCGACGATGACGAGGAATGGGTGAGGATGGTAAATGACTCAGATTTGAAAGAATGCATGGAAATATTGGATGATCATGGCACCCGTGCTGTGAAATTTCTTGTTCTCGACATCCCTAGTGGTTTGAGCAGCCGTGGCAGTAACACTTGA 2637 0.4217 MEDKFFSEGEGIGYWTPPGAQFDGPSMIDNGIKNLVSEEMLDNLPDLMNFDNLAGWGNIPSVTDHNLDNGISSLASMPYSPPDAFSLVEQDNDPYFMTKDCGNYNAIETSLGFDEKAVLQQLETQLGLSEDANDMNNINESLQELSAADMGNCLVPRPFAWSLNERMLRAMDLFKELVGDGILTQVWAPMRHGNDFILSTSEQPYLLDHMLAGYRDVSREFTFSAEDKPGSFPGLPGRVFISQIPEWTSNVGYYNKSEFLRVEHAIHHEVRGSIAVPIIDTLAEPPCCAVLELVTTKEKPDFDKELEIVSSALQLVNLRTTTPPRIMSQCLSNNKRAALTEIIDVLRALCHAYSLPLALTWIPCCYTEGVGDEASRIRIKDGGRIPGEKTVLCIEESACYINDIVVGGFVHACVEHYLEEGQGVAGKALQSNRPFFYSDVKAYNISAYPLVHHARKYKLNAAVAVRLRSIHTNDDDYIIEFFLPVNMNGSEEQQLLLNNLSDTMQRMCQSLRTVSDAELYGIEGSQVQFSKEEGSHMAPDGDHDSVQPMSLTNNETEAAHNQAMDGSRKQIEKKKSPAEKNISLSVLQQYFSGSLKDAAKSLGVCPTTLKKICRQHGISRWPSRKINKVNRSLKKIQTVLDSVKGVEGGLKFDPYKGGFMSGGSSNQEINAHKSSLFRKKSSVKYPDPAAGSKDSKPIAMDDGGLRQEPFPVSILESSWCDIAYHSPNTLVADEMADKLGEHHNPTTSSMSDSSNGSGSILRGSRKFENRKHLKAKSPCVDNGSKLVVKAAYGEDMIRFKFDPAAGCLQLYEEVATRFKLQIGSFQLKYLDDDEEWVRMVNDSDLKECMEILDDHGTRAVKFLVLDIPSGLSSRGSNT* 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0304 878 MobiDBLite consensus disorder prediction 677 704 - -
Ahy10g0304 878 Pfam RWP-RK domain 581 629 IPR003035 -
Ahy10g0304 878 PANTHER PLANT REGULATOR RWP-RK FAMILY PROTEIN 693 877 - -
Ahy10g0304 878 ProSiteProfiles PB1 domain profile. 785 867 IPR000270 GO:0005515
Ahy10g0304 878 SMART PB1_new 785 867 IPR000270 GO:0005515
Ahy10g0304 878 MobiDBLite consensus disorder prediction 742 762 - -
Ahy10g0304 878 Gene3D - 783 868 - -
Ahy10g0304 878 MobiDBLite consensus disorder prediction 740 762 - -
Ahy10g0304 878 PANTHER PROTEIN NLP8 5 694 IPR045012 GO:0003700
Ahy10g0304 878 PANTHER PROTEIN NLP8 693 877 IPR045012 GO:0003700
Ahy10g0304 878 ProSiteProfiles RWP-RK domain profile. 561 649 IPR003035 -
Ahy10g0304 878 PANTHER PLANT REGULATOR RWP-RK FAMILY PROTEIN 5 694 - -
Ahy10g0304 878 SUPERFAMILY CAD & PB1 domains 779 869 - -
Ahy10g0304 878 Pfam PB1 domain 787 864 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0304 Ahy-Chr10 2754272 2769636 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0304 1 877 NLP Transcription Factor Family AT2G43500 47.407 0.0 769
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Ahy10g0304 PB1 1.00E-14 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0304 - - ahf:112736799 1616.67