Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0266 ATGGAGAAGAAGCACCACCCTGGTGGTTCTACTTGCTCCACCAGAACTGAGAGAAAGTTCATTGAGAGAGAAAGAAGAAGCCAAATGAAGGCACTCTATTCCAACCTCAATTCTCTTCTCCCTCCTCAAACCTCAAGGGAGGGAATTTCTTCACTGCCGGATCAGCTAGAGGAAGCCACAAACTACATAAAGAAGTTACAGGTGAAGCTGGAGAAAATGAAGGAAAAGAAGAACACATTATTAGGAACAATTCATCAAATACCAAATAATAGATCTCCACAAATTGAGATCCAACAAATGGGATTCACCTTAATGGTTGTTCTCATAACTGCCTTGGATTCTCATTATTTCATGTTCATTGAGGCCATTCGTGTTCTTCATGAAGAAGGTGCAGATGTTGTTAGCGCCAGTTACAAGGTTGTTCAACATGCTGTTTTCCATACAATGCACTGCCAGGTAGGGGAGTATGGCAATGGAGCTGCTGCAAGGATATCAGAGAGACTGAAGAAGTTTGTGAATGATTCTACCTATTGTCCTTTTTAG 543 0.4162 MEKKHHPGGSTCSTRTERKFIERERRSQMKALYSNLNSLLPPQTSREGISSLPDQLEEATNYIKKLQVKLEKMKEKKNTLLGTIHQIPNNRSPQIEIQQMGFTLMVVLITALDSHYFMFIEAIRVLHEEGADVVSASYKVVQHAVFHTMHCQVGEYGNGAAARISERLKKFVNDSTYCPF* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0266 180 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 11 174 IPR015660 GO:0003700|GO:0006357
Ahy10g0266 180 Coils Coil 56 83 - -
Ahy10g0266 180 Gene3D - 9 93 IPR036638 GO:0046983
Ahy10g0266 180 Pfam Helix-loop-helix DNA-binding domain 15 67 IPR011598 GO:0046983
Ahy10g0266 180 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 13 66 IPR011598 GO:0046983
Ahy10g0266 180 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 13 87 IPR036638 GO:0046983
Ahy10g0266 180 PANTHER TRANSCRIPTION FACTOR BHLH162 11 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0266 Ahy-Chr10 2378863 2380644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0266 1 173 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 46.073 1.72e-45 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy10g0266 HLH 3.40E-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0266 - - gmx:100784418 201.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0446 20 4486504 4488257 Ahy10g0266 10 2378863 2380644 hybridization