Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0255 ATGGAACAAGAAGGAGAAGGAGGAGAAGACACGAACAAGAAGGAAAAGCAGAAGCAGTTAGTGGGAGATGCAAAAGCAGCACAAGTAGCAGTGGCAGTAAAGTGTCCAAGGTGTGATTCCATGAACACCAAATTCTGTTACTACAACAACTACAGCTTGTCGCAGCCTCGCTACTTCTGCAAAGCTTGCAAAAGGTACTGGACACATGGTGGAGCCTTGAGGAACGTTCCCGTTGGTGGCGGTTCTCGCAAGCCCAAGCGTGCCAAGCTTGCTGCTAATCCTTCCTCAGAAGCTACAGTTGTGGGGGTTCCTGCTCCTTCTTCTGTTTCTTCTGTCACTCCATTTTTCCAAGGTGATGTTGGTGGGTTTCTGTCTTCTTCGTCTCTTGGTGGTTCTGGTTTTAACAATGTGGGTTCCCATCATTTCTTTGATCAAATGATGATGGGCGGCGCAGATGAACAACAAAGATTCATGATGAATGAGAATAGGGCCCATCCTCTCATAAACCCTGATGGATCTATGTGGAGTACTTTGATGACCACCACCACTCACATCAACAATAACAATTCAAGTGGTGCTTCATCTTTTGCTTCTTCTGCTTCTGATGCTGCTGCTGCTTTGACGCTGAATCAGTGGCCTAGCACTGTCACAGGGTTTCCCCCTCTTCCTCCATCATCTTTTTGA 684 0.4693 MEQEGEGGEDTNKKEKQKQLVGDAKAAQVAVAVKCPRCDSMNTKFCYYNNYSLSQPRYFCKACKRYWTHGGALRNVPVGGGSRKPKRAKLAANPSSEATVVGVPAPSSVSSVTPFFQGDVGGFLSSSSLGGSGFNNVGSHHFFDQMMMGGADEQQRFMMNENRAHPLINPDGSMWSTLMTTTTHINNNNSSGASSFASSASDAAAALTLNQWPSTVTGFPPLPPSSF* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0255 227 Pfam Dof domain, zinc finger 33 87 IPR003851 GO:0003677|GO:0006355
Ahy10g0255 227 ProSiteProfiles Zinc finger Dof-type profile. 33 87 IPR003851 GO:0003677|GO:0006355
Ahy10g0255 227 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 20 197 - -
Ahy10g0255 227 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 20 197 IPR045174 GO:0003700|GO:0006355
Ahy10g0255 227 ProSitePatterns Zinc finger Dof-type signature. 35 71 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0255 Ahy-Chr10 2314104 2315774 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0255 35 101 C2C2-Dof Transcription Factor Family AT4G21050 73.134 1.67e-32 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Ahy10g0255 zf-Dof 3.70E-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0255 - - aip:107621958 360.147