Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0232 ATGGGGTTGGACTACTATAGGACCTTGGAGGTAGAGAGAACTGCCACAGATGAAGACTTGAAGAAAGCTTATAGAAAGCTTGCCATGAAATGGCACCCTGATAAGAATCCAACCAACAACAAAGATGCTGAGACTAAATTCAAACAGATCTCTGAAGCCTATGAGGTTCTAAGTGATCCGCATAAGAGAGCAATTTGTGATCAATATGGAGAAGATGTCCTTAAAGGGAAAAGACAACCTCCTGGTGGTGGTGGTGGTGGTGGTGGAGCTTCATTCTTCCATGGTGGGGATGGACCAACAATGTTTAGGTTCAACCCCAGAAATGCAGAAAGCATCTTTGCTGAAGTTTTTGGATGTTCAAGCCCCTATGGAGGAATGGGAATGGGAAGGGGAAGGGGCATGAGGGGTGGTTATGGTGGATCTTGGGTGTCAAGATCCTTTGGTGGAATATTTGGCAGTGACATGTTCAGTTCAGCTAGAGAAGAAGACACACCCATGAATCAAAGTCCACGCAGGGCTCCTCCCATTGAAAACACACTACTTTGCACCCTTGAGGAACTCTACAAGGGCACTACCAAAAAGATGAAGATTTCAAGGGAAGTTGTGGATGCAAGTGGGAAAGTTAGTCCTGTGGAGGAAATCTTGACCATTGAAATCAAACCTGGCTGGAAAAAGGGAACAAAAGTCACATTCCAGGAGAAAGGAAACCAGCAGCCAAATGTAATTGCTGCAGATATTGTGTTCATCATTGATGAGAAGCCTCACCATGTGTTTACAAGAGACGGTAATGATTTGGTTGTCACAGAAGAGATATCACTTACCGAAGCTGAAGCACAATCAAGCTACACTGTCCATCTTACAACTCTAGATGGCAGGGATCTGACCATTGCTGTAAACAATGTGATTAGTCCAAACTATGAAGAGGTGGTTGCAGGAGAAGGTATGCCGTTTCCAAAGGATCCTTCAAAGAGGGGTGACCTTAGGATCAAGTTCAACATACTAGTCACAGACAAGGTTGATGCTGGGGCAGAAAATCAAAACTAG 1044 0.4444 MGLDYYRTLEVERTATDEDLKKAYRKLAMKWHPDKNPTNNKDAETKFKQISEAYEVLSDPHKRAICDQYGEDVLKGKRQPPGGGGGGGGASFFHGGDGPTMFRFNPRNAESIFAEVFGCSSPYGGMGMGRGRGMRGGYGGSWVSRSFGGIFGSDMFSSAREEDTPMNQSPRRAPPIENTLLCTLEELYKGTTKKMKISREVVDASGKVSPVEEILTIEIKPGWKKGTKVTFQEKGNQQPNVIAADIVFIIDEKPHHVFTRDGNDLVVTEEISLTEAEAQSSYTVHLTTLDGRDLTIAVNNVISPNYEEVVAGEGMPFPKDPSKRGDLRIKFNILVTDKVDAGAENQN* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0232 347 PANTHER DNAJ HOMOLOG SUBFAMILY B MEMBER 13-LIKE 1 336 - -
Ahy10g0232 347 SUPERFAMILY HSP40/DnaJ peptide-binding domain 257 337 IPR008971 GO:0006457|GO:0051082
Ahy10g0232 347 Gene3D - 173 254 - -
Ahy10g0232 347 Pfam DnaJ domain 4 67 IPR001623 -
Ahy10g0232 347 PRINTS DnaJ domain signature 6 24 IPR001623 -
Ahy10g0232 347 PRINTS DnaJ domain signature 42 62 IPR001623 -
Ahy10g0232 347 PRINTS DnaJ domain signature 62 81 IPR001623 -
Ahy10g0232 347 PRINTS DnaJ domain signature 24 39 IPR001623 -
Ahy10g0232 347 Gene3D - 255 335 - -
Ahy10g0232 347 SUPERFAMILY Chaperone J-domain 4 101 IPR036869 -
Ahy10g0232 347 CDD DnaJ 4 59 IPR001623 -
Ahy10g0232 347 SUPERFAMILY HSP40/DnaJ peptide-binding domain 170 266 IPR008971 GO:0006457|GO:0051082
Ahy10g0232 347 MobiDBLite consensus disorder prediction 73 92 - -
Ahy10g0232 347 Gene3D DnaJ domain 3 126 IPR036869 -
Ahy10g0232 347 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Ahy10g0232 347 CDD DnaJ_C 174 338 - -
Ahy10g0232 347 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 336 - -
Ahy10g0232 347 SMART dnaj_3 3 62 IPR001623 -
Ahy10g0232 347 Pfam DnaJ C terminal domain 177 333 IPR002939 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0232 Ahy-Chr10 2139168 2140998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0232 5 74 C2H2 Transcription Factor Family AT1G74250 32.432 2.71e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0232 K09510 - jre:108984177 469.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0416 20 4214675 4216262 Ahy10g0232 10 2139168 2140998 hybridization