Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0227 ATGAATGGGAATGGTGAATGCATGGTCCAAGCGGCAGCATTAAATCAAATACAATCTGACTTCACTCCCCTTCTCCATTCTCTTCTTCTTCTTCTTCTTCATCACTTCACTCAAGAAACAATGCGTCCAATCTCAGTGTTGCTGGTTCTGGCGGTTCTATCAGCGGCAGCAGAGTCACTGAACCAAGAAGGACTGTTCCTGTATGAAATGAAGCTCGCCATGGAAGACCCTCATTCCACGCTCTCCAACTGGAACACCAGAGACTCCACTCCCTGCAACTGGTTCGGTGTCACCTGCCACTCCCACACCGTCGTCACCCTCGACCTCTCCTCCGCCAACCTCTTTGGCCCATTCCCCTCTCACTCCCTTTGCCGCCTCCGCAACCTCACCACCCTCATCCTCTTCAACAACTCCATCAACGACACTCTCCCTTCCGACATCTCCCTCTGCCGCTCCCTCCTCCACCTCGACCTCTCCCAGAACCTCCTCACCGGACCCCTCCCTCATTCTCTCTCCTTGCTCCCCAACCTCCGCCACCTCGACCTCGCCGGAAACAACTTCTCCGGCCCCATCCCTCCCTCCTTCGGAGCCTTCCAGAAACTCCAAGTCATCAGCCTCGTCTACAATCTTCTAGAAGGAACCATACCACCTTCCCTCGGCAACATCACCACCCTCAAGATGCTCAACCTCTCTTACAACCCATTTTCACCGGCTCCGATTCCGCCGGAGCTCGGCAACCTCACGAACCTTGAGGTTCTGTGGCTCACTCAGTGCAACCTCGTCGGTGAAATACCCGAATCACTCGGTAACCTCAAGAGCCTCGTCGACTTGGACCTTGCATTCAATAACCTCCACGGTTCCATTCCCGCTTCGCTCACCGGGTTGACTCGCCTGGTTCAGCTCGAGTTGTATAACAACTCGTTGTCCGGCGAGTTACCCAAGGGAATGTCGAACCTTACCTCCTTGAGGCTCGTTGATCTGTCCATGAACCACTTGGAAGGTGAACTTCCCGATGAGTTCTGCCGTTTACCGCTCGAAAGTCTCAACCTTTACGAGAATCGCTTCCAAGGGAACTTGCCGGCGACCATTGCAAACTCGCCGAATCTCTATGAGTTGAGGTTGTTCGACAACAGGTTCACCGGGAAGTTGCCGGAGAATCTGGGGAAGAATGCGCCGTTGAGATGGATTGATCTCTCGACCAACCAGTTCTCCGGTCCCATTCCGGGGACTCTATGCGATCACGGCCAGTTGGAGGAGCTTCTGTTGATATATAACTCGTTTTCCGGCGAGGTTCCGGCGAGTCTTGGCGCATGCACAAGCTTAACGCGTGTAAGGCTTGGTTTCAACCGGTTTTCCGGCGAGGTTCCGGCGGGTTTGTGGGGTCTTCCTCATGTGTCTCTGCTTGAGCTTGTCGACAACTCATTTTCTGGTTCAATCGCGAGTACCATTGCCGGAGCGAGGAATCTTTCGCTGTTGAGGCTTTCGAAGAACGGTTTCGAGGGTCCAATCCCTCAAGAGATTGGATGGTTGGAAACTCTTCAGGAATTTTCTGGTGGCGATAACAAGTTCAATGGCTCGTTGCCTCAGAGTTTTGTGAATCTTGGTCAGCTTGGTACTCTTGATCTGCATAACAATAAGCTCAGTGGAGAGCTTCCCAATGAGATTAAATCATGGAAGAAACTGAACGAGTTGAATTTGGCTAACAATGAGATTGGTGGTGAAATCCCTAAGGAAATTGGTAGTTTGTCAGTGCTTAATTTTCTTGATCTTTCTAATAACAAGTTTTCTGGGAAAGTGCCCCTTGGTTTGCAGAATTTGAGGCTGAATGAGCTCAATTTGTCTCATAATCAGTTGAATGGAGAACTTCCCCCAATGTTGGCTAAGGATATGTACAAGGCTAGCTTTCTTGGTAACCCTGGTTTGTGTGGGGATTTGAAGGGTTTATGTAATGGAAGAGATAAGGATAAGAGTAGAAGCTTTGTTTGGTTGCTTAGAACCATGTTCATTGTTGCCACTTTGGTGTTTGTTGTTGGTGTGGTATGGTTCTACTTCAAGTACAAGGGTTTCAAGAATGCAAGGGCTATTGATAAGTCAAAGTGGACACTGATGTCATTTCACAAACTGGGTTTTGGTGAGGATGAGATCTTGAACTGCCTTGATGAAGATAATGTGATAGGAAGCGGATCTTCTGGGAAAGTCTACAAGGTTGTGCTTAGTAACGGTGAAGCTGTCGCCGTGAAGAAGATATGGGAAGGGGTTAAGAAGGAAATAGAATGTGGTGGAGATGTCGAAAATGGCCGATTTCAAGACAATGCTTTTGATGCAGAGGTTGAGACATTGGGTAAAATTAGGCACAAGAACATTGTGAAGCTCTGGTGCTGCTGCACCACAAGGGATTGCAAGCTGTTAGTTTATGAGTACATGCCGAATGGAAGCCTTGGTGATTTGCTGCATAGCAGCAAGGGAGGGTTGTTGGATTGGCCAACCAGGTACAAGATAGCGGTTGATGCCGCAGAAGGCCTCTCTTATCTGCACCATGATTGTGTTCCTCCAATTGTACATAGAGACGTGAAATCTAACAATATCTTGCTGGATGGAGAGTTTGGTGCAAGGGTGGCAGATTTCGGAGTAGCTAAGGTTGTCGAAACCACCGGAAAAGGAACAAAATCCATGTCTGTCATAGCAGGGTCTTGTGGATATATTGCACCAGAATATGCATACACGCTTAGAGTGAATGAGAAGAGTGACATATATAGCTTTGGTGTTGTGATACTAGAGTTGGTTAGTGGAAGGAGGCCGGTAGACCCTGAATTTGGGGAAAAGGACTTGGTTTCATGGGTTTGCACAACCTTGGATCAAAAAGGTGTGGAGCATGTGGTTGACTCAAGGCTAGATTCTTCTTTCAAACAAGATATATGTAAGGTGCTCAACATTGGCCTTGTGTGCACAAGCCCCCTCCCAATAAACCGGCCTGCAATGAGAAGAGTGGTGAAGATGTTGCAAGAGCTTGGCACCACCACCCCTCCTAACCCCAGATATCAACAGAACAAAGTCAACCAAGAATGA 3066 0.4866 MNGNGECMVQAAALNQIQSDFTPLLHSLLLLLLHHFTQETMRPISVLLVLAVLSAAAESLNQEGLFLYEMKLAMEDPHSTLSNWNTRDSTPCNWFGVTCHSHTVVTLDLSSANLFGPFPSHSLCRLRNLTTLILFNNSINDTLPSDISLCRSLLHLDLSQNLLTGPLPHSLSLLPNLRHLDLAGNNFSGPIPPSFGAFQKLQVISLVYNLLEGTIPPSLGNITTLKMLNLSYNPFSPAPIPPELGNLTNLEVLWLTQCNLVGEIPESLGNLKSLVDLDLAFNNLHGSIPASLTGLTRLVQLELYNNSLSGELPKGMSNLTSLRLVDLSMNHLEGELPDEFCRLPLESLNLYENRFQGNLPATIANSPNLYELRLFDNRFTGKLPENLGKNAPLRWIDLSTNQFSGPIPGTLCDHGQLEELLLIYNSFSGEVPASLGACTSLTRVRLGFNRFSGEVPAGLWGLPHVSLLELVDNSFSGSIASTIAGARNLSLLRLSKNGFEGPIPQEIGWLETLQEFSGGDNKFNGSLPQSFVNLGQLGTLDLHNNKLSGELPNEIKSWKKLNELNLANNEIGGEIPKEIGSLSVLNFLDLSNNKFSGKVPLGLQNLRLNELNLSHNQLNGELPPMLAKDMYKASFLGNPGLCGDLKGLCNGRDKDKSRSFVWLLRTMFIVATLVFVVGVVWFYFKYKGFKNARAIDKSKWTLMSFHKLGFGEDEILNCLDEDNVIGSGSSGKVYKVVLSNGEAVAVKKIWEGVKKEIECGGDVENGRFQDNAFDAEVETLGKIRHKNIVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSSKGGLLDWPTRYKIAVDAAEGLSYLHHDCVPPIVHRDVKSNNILLDGEFGARVADFGVAKVVETTGKGTKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVSGRRPVDPEFGEKDLVSWVCTTLDQKGVEHVVDSRLDSSFKQDICKVLNIGLVCTSPLPINRPAMRRVVKMLQELGTTTPPNPRYQQNKVNQE* 1022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0227 1021 Pfam Leucine Rich Repeat 249 271 IPR001611 GO:0005515
Ahy10g0227 1021 ProSiteProfiles Protein kinase domain profile. 719 1003 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy10g0227 1021 Gene3D Phosphorylase Kinase; domain 1 703 807 - -
Ahy10g0227 1021 SUPERFAMILY RNI-like 94 411 - -
Ahy10g0227 1021 PANTHER LRR RECEPTOR-LIKE KINASE 44 1011 - -
Ahy10g0227 1021 Gene3D Ribonuclease Inhibitor 65 172 IPR032675 -
Ahy10g0227 1021 Gene3D Ribonuclease Inhibitor 345 651 IPR032675 -
Ahy10g0227 1021 SUPERFAMILY RNI-like 345 628 - -
Ahy10g0227 1021 SUPERFAMILY Protein kinase-like (PK-like) 715 1001 IPR011009 -
Ahy10g0227 1021 Pfam Leucine rich repeat 127 187 IPR001611 GO:0005515
Ahy10g0227 1021 Pfam Leucine rich repeat N-terminal domain 61 99 IPR013210 -
Ahy10g0227 1021 Gene3D Ribonuclease Inhibitor 173 241 IPR032675 -
Ahy10g0227 1021 Gene3D Ribonuclease Inhibitor 242 344 IPR032675 -
Ahy10g0227 1021 ProSitePatterns Serine/Threonine protein kinases active-site signature. 852 864 IPR008271 GO:0004672|GO:0006468
Ahy10g0227 1021 SMART serkin_6 719 986 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy10g0227 1021 Gene3D Transferase(Phosphotransferase) domain 1 808 1019 - -
Ahy10g0227 1021 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 44 1011 - -
Ahy10g0227 1021 Pfam Protein kinase domain 721 942 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy10g0227 1021 SMART LRR_typ_2 534 557 IPR003591 -
Ahy10g0227 1021 SMART LRR_typ_2 295 318 IPR003591 -
Ahy10g0227 1021 SMART LRR_typ_2 247 271 IPR003591 -
Ahy10g0227 1021 SMART LRR_typ_2 126 150 IPR003591 -
Ahy10g0227 1021 SMART LRR_typ_2 319 343 IPR003591 -
Ahy10g0227 1021 SMART LRR_typ_2 174 200 IPR003591 -
Ahy10g0227 1021 ProSitePatterns Protein kinases ATP-binding region signature. 725 748 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0227 Ahy-Chr10 2082725 2086356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0227 59 1004 Receptor kinase-like Gene Family AT1G28440 69.958 0.0 1379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Ahy10g0227 Pkinase 1.20E-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0227 - - gmx:100819887 1521.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0410 20 4156164 4159859 Ahy10g0227 10 2082725 2086356 hybridization