Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0210 ATGGCTTCTTCTAACAGACACTGGCCAAGCATGTTTAAGTCCAAGCCCACATGGCACCATGATATCACTATCACCGCCACTGCCTCTTCTTCTTCTTCTTCTAGTAGTAGTAGTAGAACCTCTCCTTACTCTTGCGACGACAGAAGCCCTGAGCCCAAGCCCAGGTGGAACCCAAAGCCCGAGCAGATTCGGATCCTGGAGTCCATATTCAACTCTGGGATGGTGAACCCTCCCAGGGATGAGATCAGGAAGATAAGGGCTCAGTTGCAAGAGTACGGTCAAGTTGGTGATGCCAATGTCTTCTACTGGTTCCAGAACCGCAAGTCTAGAACCAAACACAAGCTCCGCCACCTCCACACCAAGAATAACCCTCCTCCTCCTCCTCCTCCTCCTTCATCCACCTCCTCCTCCTCTTCCGACAAGTCATCATCCCCACCCACTACTACCACTACTACTACTACCACCACCAATACCTATTTCAATACCCACAATCACACCGCCACTATTCCACCACCACCACCACCGCCGCCGCCGCACGTGGCTGCTGAGACTTTCATCTTCCCGCTGCAACATCATCAAGGTATAACATCATCCCCGCAAGGGCTTTTCTTCTCTGAGCTCTCCAATGTGGTGCAAGCTCATCATCATCAGCCGTCTCCACCACCACCTCATCAGCTCATGATGCATAACGTCGTTGGTCCCTGCACTAGTCTCTTGCTTAGTGAGATCATGATGAATAATAATGCTTCAAAGAAAGAACAACAAGAACATGCCAGCAACAACAATAAGTCCCTCAAATTAATGCACCACACACCAAAGCTTAGTTTCTGCGTCACTCCACCTACTACTACAACCGCCACCACCGCCACCGTCAACGCTCTCCTCACTCAAGATGCAGTAGGTAGTGGAGATGGAAGTGAGAAAATAACGGTGTTCATAAATGATGTGGCGTTTGAGGTGGCGGCGGGGCCATTCAATGTAAGGGAGGCATTTGGGGAGGATGCAGTCCTCATTCACGCCATAACTGGTCAACCTCTTCTCACTAACCAATGGGGTCTTACCCTCCACTCTCTCCACCATGGCGCTTCTTATTATCTGCTTCTTCATACCCTCCCTCACGCACCTTATTAA 1131 0.5022 MASSNRHWPSMFKSKPTWHHDITITATASSSSSSSSSSRTSPYSCDDRSPEPKPRWNPKPEQIRILESIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRTKHKLRHLHTKNNPPPPPPPPSSTSSSSSDKSSSPPTTTTTTTTTTNTYFNTHNHTATIPPPPPPPPPHVAAETFIFPLQHHQGITSSPQGLFFSELSNVVQAHHHQPSPPPPHQLMMHNVVGPCTSLLLSEIMMNNNASKKEQQEHASNNNKSLKLMHHTPKLSFCVTPPTTTTATTATVNALLTQDAVGSGDGSEKITVFINDVAFEVAAGPFNVREAFGEDAVLIHAITGQPLLTNQWGLTLHSLHHGASYYLLLHTLPHAPY* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0210 376 Pfam Homeodomain 53 113 IPR001356 GO:0003677
Ahy10g0210 376 SUPERFAMILY Homeodomain-like 49 117 IPR009057 -
Ahy10g0210 376 SMART HOX_1 51 118 IPR001356 GO:0003677
Ahy10g0210 376 MobiDBLite consensus disorder prediction 23 61 - -
Ahy10g0210 376 ProSiteProfiles 'Homeobox' domain profile. 49 114 IPR001356 GO:0003677
Ahy10g0210 376 MobiDBLite consensus disorder prediction 135 166 - -
Ahy10g0210 376 MobiDBLite consensus disorder prediction 111 182 - -
Ahy10g0210 376 Gene3D - 24 113 - -
Ahy10g0210 376 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 368 IPR044557 GO:0003700|GO:0050793
Ahy10g0210 376 CDD homeodomain 52 114 IPR001356 GO:0003677
Ahy10g0210 376 MobiDBLite consensus disorder prediction 23 45 - -
Ahy10g0210 376 MobiDBLite consensus disorder prediction 46 60 - -
Ahy10g0210 376 MobiDBLite consensus disorder prediction 167 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0210 Ahy-Chr10 1921315 1922989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0210 1 371 Wox Gene Family AT2G33880 43.675 1.56e-84 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Ahy10g0210 Homeodomain 2.00E-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0210 - - aip:107619964 591.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0395 20 4039416 4041188 Ahy10g0210 10 1921315 1922989 hybridization