Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0207 ATGGACAGTCATAGTAATGATGCAAATTCTGAAGGGATTCTTGAGAATGTATGGGCCAAAATTATCAGCAATCAAAGAGGAGCCGATCATGTGAGAACATATGGTGATGGTGATGTTGCAGCAGAACAATCATGGGAAGAACTTCCACAACTTGATGGAAGAGACAACAATAACGGTTCAGTGGGAATTCTGCAGAGGCTTCCAAGCTTAGGGAGGTGGATATCAATGGGAGCAGATTTCTGGGAAGATGTTTTAGATGGAGTTGTTAACATTACACCAAATGATGCAGCAACAACAACAAACAATAACGAACAAGATTGTAATAAGAAGGTAGAACTAGAGAAGAGGGTGATGAAAACAGAGAAAAAAGTGGTGACAAAGCACTACAGAGGAGTAAGGAGAAGGCCATGGGGGAAATATGCGGCGGAGATTCGAGATTCGTCGAAGAAAGGAGCTAGAGTTTGGCTTGGAACATTTGAGACGGCTGAAGAGGCAGCATTGGCATATGATAAAGCTGCTTTGAGGATTAGAGGGCCAAAGGCATACCTCAATTTCCCATTTGACACTGTTTCAAAAGCTATAGAATTTGATCATCATTATTGTAGTAAGAGAGGGTCATCTGTGGTGTTGAATGAGCAACCTCCAACAAAGAAGGTAGCAGGAGGGTTTCATGATCATCATGAAGAAGTAGATGTTTTTGTGTTTCAGGATTTAGGAAGTGATTACTTGGATAATTTGCTGTCTTCTTTTTAA 753 0.409 MDSHSNDANSEGILENVWAKIISNQRGADHVRTYGDGDVAAEQSWEELPQLDGRDNNNGSVGILQRLPSLGRWISMGADFWEDVLDGVVNITPNDAATTTNNNEQDCNKKVELEKRVMKTEKKVVTKHYRGVRRRPWGKYAAEIRDSSKKGARVWLGTFETAEEAALAYDKAALRIRGPKAYLNFPFDTVSKAIEFDHHYCSKRGSSVVLNEQPPTKKVAGGFHDHHEEVDVFVFQDLGSDYLDNLLSSF* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0207 250 Gene3D AP2/ERF domain 127 189 IPR036955 GO:0003700|GO:0006355
Ahy10g0207 250 Pfam AP2 domain 128 178 IPR001471 GO:0003700|GO:0006355
Ahy10g0207 250 ProSiteProfiles AP2/ERF domain profile. 128 186 IPR001471 GO:0003700|GO:0006355
Ahy10g0207 250 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF091 15 250 - -
Ahy10g0207 250 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 15 250 - -
Ahy10g0207 250 SUPERFAMILY DNA-binding domain 128 187 IPR016177 GO:0003677
Ahy10g0207 250 SMART rav1_2 128 192 IPR001471 GO:0003700|GO:0006355
Ahy10g0207 250 CDD AP2 127 186 IPR001471 GO:0003700|GO:0006355
Ahy10g0207 250 PRINTS Ethylene responsive element binding protein signature 152 168 IPR001471 GO:0003700|GO:0006355
Ahy10g0207 250 PRINTS Ethylene responsive element binding protein signature 129 140 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0207 Ahy-Chr10 1895300 1896176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0207 13 197 AP2-EREBP Transcription Factor Family AT4G18450 45.213 1.02e-37 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Ahy10g0207 AP2 1.60E-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0207 - - lang:109334345 267.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0392 20 4012905 4013865 Ahy10g0207 10 1895300 1896176 hybridization