Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0203 ATGTATAGAAAGTTAACTCGGGTGGTGATGGTATCATGGCTCTTCCTAGTTCTGATTCTTAATTCAAGCTACACTGCAAGTCTTTCTTCAATGCTCACAGTGAAGCAGCTGCAGCCAAATGTCACAGACATTGAGTGGCTGAAGAAGAACAACATGAAGATTGGTTGTGATGGTGACTCATTTGTTAGAAACTACCTAGAGGATGTGGAGAAGTTCAAGCCAGAAAACATAATCAACATTACCAGTGAAGACAGATATATTGATGCATTTGCAAATGGTAGCATAGTAGCTGCATTTCTTGAATTACCCTATGAAAAAGTATTCATTAGCGAATATTGTGATGGATACACTGCCTCCATTCCCAGAACTAGATTTGGAGGATTAGGCTTTATGTTCCAGAAAGGCTCCCCGGTGACAAGAGATGTTTCCAGAGCTATATTACATCTCTCAGAAAATGGAGAGCTGAAAAAGTTGGAAGAGGAATGGTTGTTTAGTGCATCACAGAAATGCTCCAACAATATGACCTCCAATGGCATGGAAAGCTTGAGTCTAAGAAGCTTGTGGATTCTATTCGTCATCTCCGGTGCCACTTCCACTATTTGTATGCTACTATCAGCAATGCCATGGCAAAAGTTGTCTCCAAAGTCAAGAATTGGCACCAGAACATAA 669 0.4066 MYRKLTRVVMVSWLFLVLILNSSYTASLSSMLTVKQLQPNVTDIEWLKKNNMKIGCDGDSFVRNYLEDVEKFKPENIINITSEDRYIDAFANGSIVAAFLELPYEKVFISEYCDGYTASIPRTRFGGLGFMFQKGSPVTRDVSRAILHLSENGELKKLEEEWLFSASQKCSNNMTSNGMESLSLRSLWILFVISGATSTICMLLSAMPWQKLSPKSRIGTRT* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0203 222 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 1 215 - -
Ahy10g0203 222 SUPERFAMILY Periplasmic binding protein-like II 23 163 - -
Ahy10g0203 222 Pfam Ligand-gated ion channel 5 196 IPR001320 GO:0015276|GO:0016020
Ahy10g0203 222 Pfam Bacterial extracellular solute-binding proteins, family 3 24 163 IPR001638 -
Ahy10g0203 222 Gene3D - 81 172 - -
Ahy10g0203 222 Gene3D - 3 75 - -
Ahy10g0203 222 PANTHER GLUTAMATE RECEPTOR 3.4 1 215 - -
Ahy10g0203 222 SMART GluR_14 6 165 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0203 Ahy-Chr10 1874164 1875127 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0203 5 204 Ion Channels AT2G17260 36.000 1.43e-36 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0203 - - lja:Lj6g3v2006160.1 323.168