Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0202 ATGGTGATTCACTTGTTCAGAGAAGCTTCAAATATAGGACTTGTAGATAAAGAATCAGTTTGGATAATCCCAGAGAGCATAACCAATCTAATTGACTCCATCAACAAGTCTTCCATTTCATACATGGAAGGAGCTATAGGAATCAAGAACTACTACTCTGAAGGAAACAACAAGTACCAAGATTTTGAGGCTCAGTTTCAGAGAACTTTCTGGCCAAGAAGCCCCGAAGAAGATAACCGAAAGCCTGGATTTTTTGCTTTGCAAGCATATGATAGCATTAACATTGTGACTCAAGCACTGGACAGAATGAGCAATGGCAAAAGCAGCACAAATACCTTACTAAGAGAAATACAGTCAAGCAAATTTTCTGGTTTAAGTGGCCATATTGAATTTGAAGATGGAAAACTGCTGCAGAATCCTATCTTGAGAGTAGTGAATGTGGTTGGGAAGAGTTACAAAGAGTTGTGCTTTTGGACTCAGCAACATGGATTCTCCACAAGCTTCCATGCAACAAGACAAGATGGTGGTAATGGTAACCATGTTTCAGAATGCTTCAATGCTGTACTTTGGCCTGGGAATTTGCAAAGGACACCAAAGGGATGGAAAATGCCTACTAAACAAAAACCTATGAAAATCGCGGTCCCAGGCAGAACTACATTTTCCAGGTTTGTCAAGGTTGATTATGCCAAGAATCAAAACCTTGATAACTATGATGGATTCTGCATCAAGATTTTTGAGCAGGTGCACAAAATTTTGGGGTATGATCTACCCTATAAGTTCCATGCTATCAATTGCACCTATCCTGATTTGGTTCAATTAGTCTATAACAAGAGTTATGATGCTGTTATTGGGGATATTACGATACTAGAGGAAAGATTGCCATATGTGGACTTCACTGTGCCATATGCAGAATCAGGATTGTCAATGTTAGTTCCAGCAAAGTCTGAAGAATCAGCATGGATGTTCACCAAGCCATTTACCTGGCAACTTTGGACAGTTACAGGAGCCATCTTGATCTATACAATGTTAGTAGTTTGGCTACTTGAGAAAGAACCTAATCCAGAGTTTCATGGCAATTGGAAGAGCCAGATCAGCACTGCTCTTTGGTTTACCGTCTCCTCTTTGTTCTTTGCTCACAGTTAG 1143 0.3998 MVIHLFREASNIGLVDKESVWIIPESITNLIDSINKSSISYMEGAIGIKNYYSEGNNKYQDFEAQFQRTFWPRSPEEDNRKPGFFALQAYDSINIVTQALDRMSNGKSSTNTLLREIQSSKFSGLSGHIEFEDGKLLQNPILRVVNVVGKSYKELCFWTQQHGFSTSFHATRQDGGNGNHVSECFNAVLWPGNLQRTPKGWKMPTKQKPMKIAVPGRTTFSRFVKVDYAKNQNLDNYDGFCIKIFEQVHKILGYDLPYKFHAINCTYPDLVQLVYNKSYDAVIGDITILEERLPYVDFTVPYAESGLSMLVPAKSEESAWMFTKPFTWQLWTVTGAILIYTMLVVWLLEKEPNPEFHGNWKSQISTALWFTVSSLFFAHS* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0202 380 Pfam Receptor family ligand binding region 4 148 IPR001828 -
Ahy10g0202 380 SUPERFAMILY Periplasmic binding protein-like II 185 337 - -
Ahy10g0202 380 PANTHER GLUTAMATE RECEPTOR 3.4 1 379 - -
Ahy10g0202 380 SUPERFAMILY Periplasmic binding protein-like I 3 201 IPR028082 -
Ahy10g0202 380 Pfam Bacterial extracellular solute-binding proteins, family 3 235 315 IPR001638 -
Ahy10g0202 380 Gene3D - 228 304 - -
Ahy10g0202 380 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 1 379 - -
Ahy10g0202 380 Gene3D - 305 316 - -
Ahy10g0202 380 Gene3D - 318 380 - -
Ahy10g0202 380 Gene3D - 87 213 - -
Ahy10g0202 380 Gene3D - 1 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0202 Ahy-Chr10 1872739 1874072 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0202 4 379 Ion Channels AT2G29120 30.597 1.83e-67 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0202 - - ahf:114924593 787.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0388 20 3972288 3976740 Ahy10g0202 10 1872739 1874072 hybridization