Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0201 ATGCCTAAGGAAGCCTATACATCAAAACATACAAAAGAAACTCCAACAAACTGTTTATGCAGCATGCATTATTGCCCTTCAACTATTCTTCAATCACTTGCAATGACTTGGCTCTTCTTTTTTCTTGTTTTCATCATGAATGCAAACTCCCATGAGGCCAAGAATGAATGCAACAAAGTTATATCAGTTGGGGTGATTATGGATGCTAATTCTCGTGTGGGGAAAGAGCAGAGAGTAGCCATGGAAATTGCAGCACAAACTTACAATAGCACTTCAAAGAACTACAAGTTGTCTCTCCATTTTCATAACTCTACCATGGACCCCATAAGTGACACCAATCTTGCGGAAGAAATGATAAGAATGCAGAAAGTGCAAGTGATTTTAGGCTTCCACACATGGCCAGAAGCAGCTCTTATAGCTGAAATAGGATCGCGGTTTCAAGTTCCTATTATATCCTATGCAGAACCTTTGATTACTCCACCATTGATGTCAATCCGGTGGCCATTTTTGGTAAGAATGGCCAACAGTGGCAGAGCATATGTAAAATGCATTGTGGAAATAGTCAAAGCTTATGGCTGGCAAAGAGTAATAGCCATCTATGAAGATGATGCCTATGGTGGAGAACAAGGGATGCTAGCCCTGCTATCTGAGGCCCTCCAAGATGCAAATTCAATGATTGAATACAATTTATTCTTCCACCAATTTCTTCTTTGCATGATCCAAGAGGGCTAG 732 0.4057 MPKEAYTSKHTKETPTNCLCSMHYCPSTILQSLAMTWLFFFLVFIMNANSHEAKNECNKVISVGVIMDANSRVGKEQRVAMEIAAQTYNSTSKNYKLSLHFHNSTMDPISDTNLAEEMIRMQKVQVILGFHTWPEAALIAEIGSRFQVPIISYAEPLITPPLMSIRWPFLVRMANSGRAYVKCIVEIVKAYGWQRVIAIYEDDAYGGEQGMLALLSEALQDANSMIEYNLFFHQFLLCMIQEG* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0201 243 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 40 232 - -
Ahy10g0201 243 Gene3D - 68 175 - -
Ahy10g0201 243 SUPERFAMILY Periplasmic binding protein-like I 58 231 IPR028082 -
Ahy10g0201 243 Pfam Receptor family ligand binding region 79 226 IPR001828 -
Ahy10g0201 243 PANTHER GLUTAMATE RECEPTOR 3.4 40 232 - -
Ahy10g0201 243 Gene3D - 176 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0201 Ahy-Chr10 1871678 1873546 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0201 41 228 Ion Channels AT4G31710 32.105 3.71e-26 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0201 - - ahf:114924053 494.197