Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0200 ATGGAGACATGGCAGGAAACAGCTCTAGTTGCTGATCTTGGAGCTAAAGCTCAAGTACCAGTTATTTCATTCTCTGCTCCACCTATAGTACCTCCATTAATGCAAACTCGTTGGCCTTTCTTGATTCAAATGGCTGATAATTACACTGCACATATGAACTGCATAGCAGATATTATCCATTCATACAACTGGCAAAAGGTTGTAGCAATATATGAAGATGACTTTTATAGCAGCTATTCCGGTATGTTAAGCCTCTTATCTGAGGCTCTACAAAAGGTTGATTCTGAGATTGAGTACCAACTAGCTCTTCCACCATTTAGTTCTTTAACTGATCCAAAAGGGGTTGTTCTTGATGAGTTGCTTAAGCTATTGCAAGTAAAATCTCGGGTTTTCGTTGTTCTTCAAGCATCATTACCTATGGTAACACATTTGTTCAGAGAAGCAAGGAAAATTGGATTGATGGGAAAAGATTCAGCTTGGATAATCAATGAAGGGAGTACTAGTACATTTGAATCTTACAACACAACCATTTTATCCTCTATGGAGGGTGCTTTGGGAATCAAAACCTACTATTCTACAAGCTCTATTGCTTATACTCAGTTTCAAGAGAATTTCCAAGCTGGAACATCTAAACCAGGATTATATGCACTAAGAGCCTATGATAGCATCACAATGATCACAAAAGCCTTGGAGAAAATGAATGCTAACTCTAGCAACTCAAGAGTGTTCATGGAGAAAATGTTGTCAAGCAATTTTGATGGCTTAAGTGGGAGCATAAGTTTCAAAGAAAGCCAGTTATCCTACACTCCAAGAATGAGAGTCATAAATGTGGTTAATAACAGATACACAGAACTGGACTTTTGGACCCCAGAATTGAAGTTTGAAAGATCTCTTAAAACACTGGAAGACATAGAGAAAAGAGATGATCTTGGTACAAGAAACATAACTGGCACAGTGGTTTGGCCTGGAGGCCTAAATTCTACTGTTCATATTCCTATGGGATGGAAGTTACCAACAGATACAAATCCTTTAAAAGTTGCAGTTCCTGTAAACCCAGCTTTTGAAAACTTTGTAAAGGAAGTATCACAAAATCAATATCAAGGTTTCTGTATTGATCTTTTCTACTCAATAAGACAAATTCTGAGTGAGAACTATGGTGACCTATTGCCCTATGAATTTCATTCCTTCAATGAATCCTATGACAGTCTTTTTCAGAATGTCATAAATGAGTCCTATGATGCTATAGTGGGAGATGTAACAATCCTTGCGAATCGATCAAAGTATGTTTCGTTCACTCAACCATACACTGAGTCAGGTTTATCACTCATTCTTCCAGTAGAGACTGAAGGGTCAGCATGGTTGTTTATGAAACCATTTAGCTGGCAAATGTGGATAGCAACTAGTAGCATCCTCATCTACACAATGTTTATCATCTGGTTCTTAGAACATAAACTGAATCCAGAATTTGGTGGACCACTGAAAAATCAGATCAGCACCACACTGTGGTTTGCTTTTTCTTCTCTATTTTTTTCTCACAGAGAGAAAATAAACAGCAACTCTGCAAGAGTAGTAGTTGGTGTATGGCTATTTCTTGTGTTTGTTCTAACATCAAGCTACACTGCAAGCCTTTCTTCAATGCTCACTGTTACAAAGTTGAAATCTGGAAGAGATATTAATTGGCTGAGGCAAAATAATTTACCAGTTGGATGTGACAATGTCAGTACCTTTGTCAAGGACTACATGGTGAATGTATATAAATTACATCCAAAGCAAATTATAGATGTTGATGGTGAGAGTGATATTGTGGAAAAATTCAAGACCAAACAAATTGTTGCTCTATTTCTTGAGAGTCCATATGAGAAGGTTTTCTTGAATAAGTATTGCAATCAATATTCTTCAACCACAGCTGCATATAGATTTGGAGGAATGGGATTTGTATTCCAAAAAGGATCTCCAATGGCAAAGGACTTCTCTGAAGCAATTTTAACACTGGCTGAAGATGGAACACTAAAGAAATTGGAAAATGAATGGTTGACACCATCCAATGAATGCTCAAACACATCATCCCCTCAAACAGAGAGCCTGACCCTCAGCAATTTCTTGGGCCTCTATGCCATATGTGCTGCTACATCCACCATTTGCTTAGTGCTGGCATTGCTGACAAAATGGCACCATCATCATCATCATAATCAAGAAGAAGAAGCAGCAAGTCAACAAGAAAGGAAAGATGAGGATAGTGTTTTGAAGAGAGCATTTAGATTGAGCACAGAACTATATAATGGGAGCCTCAAAACACTAGATAGAGCTGCAACTACACAAGGGGTGCGCCTTAGGAATAATTCATCAAGGTGGGAGAGTGTAAGCACTTCTGAGCATGTAGCAAATAATCCACAACGCTCCCACTCAGCTGTCATAAGAATGCTATAA 2427 0.382 METWQETALVADLGAKAQVPVISFSAPPIVPPLMQTRWPFLIQMADNYTAHMNCIADIIHSYNWQKVVAIYEDDFYSSYSGMLSLLSEALQKVDSEIEYQLALPPFSSLTDPKGVVLDELLKLLQVKSRVFVVLQASLPMVTHLFREARKIGLMGKDSAWIINEGSTSTFESYNTTILSSMEGALGIKTYYSTSSIAYTQFQENFQAGTSKPGLYALRAYDSITMITKALEKMNANSSNSRVFMEKMLSSNFDGLSGSISFKESQLSYTPRMRVINVVNNRYTELDFWTPELKFERSLKTLEDIEKRDDLGTRNITGTVVWPGGLNSTVHIPMGWKLPTDTNPLKVAVPVNPAFENFVKEVSQNQYQGFCIDLFYSIRQILSENYGDLLPYEFHSFNESYDSLFQNVINESYDAIVGDVTILANRSKYVSFTQPYTESGLSLILPVETEGSAWLFMKPFSWQMWIATSSILIYTMFIIWFLEHKLNPEFGGPLKNQISTTLWFAFSSLFFSHREKINSNSARVVVGVWLFLVFVLTSSYTASLSSMLTVTKLKSGRDINWLRQNNLPVGCDNVSTFVKDYMVNVYKLHPKQIIDVDGESDIVEKFKTKQIVALFLESPYEKVFLNKYCNQYSSTTAAYRFGGMGFVFQKGSPMAKDFSEAILTLAEDGTLKKLENEWLTPSNECSNTSSPQTESLTLSNFLGLYAICAATSTICLVLALLTKWHHHHHHNQEEEAASQQERKDEDSVLKRAFRLSTELYNGSLKTLDRAATTQGVRLRNNSSRWESVSTSEHVANNPQRSHSAVIRML* 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0200 808 PIRSF IGluLR_plant 1 807 IPR017103 -
Ahy10g0200 808 Gene3D - 622 686 - -
Ahy10g0200 808 PANTHER GLUTAMATE RECEPTOR 1 804 - -
Ahy10g0200 808 Gene3D - 453 586 - -
Ahy10g0200 808 Gene3D - 339 452 - -
Ahy10g0200 808 Gene3D - 49 215 - -
Ahy10g0200 808 SUPERFAMILY Periplasmic binding protein-like II 331 679 - -
Ahy10g0200 808 SUPERFAMILY Periplasmic binding protein-like I 4 289 IPR028082 -
Ahy10g0200 808 Pfam Ligand-gated ion channel 680 709 IPR001320 GO:0015276|GO:0016020
Ahy10g0200 808 Pfam Bacterial extracellular solute-binding proteins, family 3 345 679 IPR001638 -
Ahy10g0200 808 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 1 804 - -
Ahy10g0200 808 Pfam Receptor family ligand binding region 8 278 IPR001828 -
Ahy10g0200 808 SMART GluR_14 345 680 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0200 Ahy-Chr10 1867024 1870698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0200 2 728 Ion Channels AT2G29120 32.418 1.11e-115 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0200 - - gmx:100818078 1112.83