Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0174 ATGCATACTCTTCCTCCTCCATCATCATCATCATCATCTTCTTCTTCTTCTAATTCTATTTGGGTATTGTCTAGCATAAAGCTTCAATTCTTTGCACGAATCAGAAGGTTCCTCCAATCAAAAGCGACACGAAAGCGCCGAAACCAACCAAGAAACAGAGCTGAGCAGAACAACAACGACAATAACAAGGTCGAAAAAGTTGTTGAAACGGTTCAAGTCATGGAGAAGCATGAGGAGGAGAAGGAAGAAGAGGAGGACTCTGCTATCATATTGCAGAGGACAGTGAAGAAGCTTCACTTTGGAAGCTGGGAAGAGAAGGAGGTGGCAGCCAAGGATATTGGAAATTTGGCAAAAGAAGATTTGAAGGTTAGAAAGTTGATAACAGAACTCGGTGTGGTGCCTGTGTTGGTCTCTATGGTGGCTTCCGACGTGGCCACCCGTCGCAGAGCGGCGTTGGTGGCGTTGATCCACCTTGCTGATGGAACTTACACGAACAAGGCTATGATAGTGGAGGCAGGAATATTATCCAAGCTGCCAAACACAGTTGACAATGTAGATGAATCAACAATCAATGAATTTTCTGAGTTGCTGTTATCGTTGTCTTCACTAGCAAACACCCAATTCCATTTTCCTTCATTGGACTTTCTACCATCACTAAGACACATTCTTGAGTCAAACTCATCAAGCTTAGACACAAAAACATCATGTTTGGGTGCCCTATACAACTTTTCAAGCGTGTTAGAGAACGCGGGAGCTTTGGTTTCATGTGGGATTGTTCCTATTTTATTAGAACTATCCTCAAGAAAAGAAACTTCAGAGAAAGCATTGGCAAGTCTAGGGAACTTGTTAGTGAGCATGATGGGGAAGAAAGCAATAGAGAATAGTTGTTTAGTGCCAAAGAACTTCATTGAGATCTTGTCATGGGAAGACAAACCGAAATGCCAAGAGTTATCGGTTTATATATTGATGATCCTAGCGCATCAAAGTTCAAGTCAAAGGGAGAAAATGGCAGAGGCTGGCATTGTTCCTGTGCTTCTTGAAGTGGTTCTGTTGGGAAGCTCTTTGGCTCAGAAGAGAGCATTGAAGCTATTGCAATGGTTCAAGGATGAGAGGCAAACCAAGATGGGGCCACATTCGGGGCCACAAACACCGAGGTTTGCATCGATGGGGTCACCGGTGAATCAAAGAGAAGCAATGGAAGGGAAGAAGATGATGAAGAGTTTGGTTAAACAAAGCTTGCATAGGAACATGGAGATTATTACTCACAGGGCTAATGCTGCTGGAGACTCTTCTAGATTTAAGTCATTGGTTATTAGCACGAGTTCTAAGAGTTTGCCTTATTAA 1344 0.4301 MHTLPPPSSSSSSSSSSNSIWVLSSIKLQFFARIRRFLQSKATRKRRNQPRNRAEQNNNDNNKVEKVVETVQVMEKHEEEKEEEEDSAIILQRTVKKLHFGSWEEKEVAAKDIGNLAKEDLKVRKLITELGVVPVLVSMVASDVATRRRAALVALIHLADGTYTNKAMIVEAGILSKLPNTVDNVDESTINEFSELLLSLSSLANTQFHFPSLDFLPSLRHILESNSSSLDTKTSCLGALYNFSSVLENAGALVSCGIVPILLELSSRKETSEKALASLGNLLVSMMGKKAIENSCLVPKNFIEILSWEDKPKCQELSVYILMILAHQSSSQREKMAEAGIVPVLLEVVLLGSSLAQKRALKLLQWFKDERQTKMGPHSGPQTPRFASMGSPVNQREAMEGKKMMKSLVKQSLHRNMEIITHRANAAGDSSRFKSLVISTSSKSLPY* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0174 447 MobiDBLite consensus disorder prediction 41 65 - -
Ahy10g0174 447 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 80 447 - -
Ahy10g0174 447 MobiDBLite consensus disorder prediction 373 392 - -
Ahy10g0174 447 SUPERFAMILY ARM repeat 95 367 IPR016024 -
Ahy10g0174 447 SMART arm_5 120 160 IPR000225 GO:0005515
Ahy10g0174 447 SMART arm_5 162 202 IPR000225 GO:0005515
Ahy10g0174 447 SMART arm_5 245 284 IPR000225 GO:0005515
Ahy10g0174 447 Coils Coil 67 94 - -
Ahy10g0174 447 MobiDBLite consensus disorder prediction 376 390 - -
Ahy10g0174 447 Gene3D - 54 422 IPR011989 -
Ahy10g0174 447 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 80 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0174 Ahy-Chr10 1647137 1650950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0174 104 384 U-box Gene Family AT1G67530 27.778 3.32e-14 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0174 - - adu:107468248 764.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0363 20 3751069 3754696 Ahy10g0174 10 1647137 1650950 hybridization