Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0150 ATGTCTAAAGAATATGCGGATGAGATTATTATTGAAGAAGATGAGGAAACTTCTTCATTGGGATGTTGTTCCCAGAAATGCTCTTCATTTGATTTGAATGAAGAAGCAAGCAGTGAAGAAGAAGAAGAAGAAGGAGGTAAGAATAAGAAGGAGGAGGATGAGGCAGCATGTGATGAAGAGGAGATCAATGCGAATGGAACATCAAACTCAAGAGAAGATGAAAGAAATAATAACAACAAAAACAATGAGAGAAGAGGTGGAGTTAGGCAATATGTTAGATCCAAGATGCCAAGGCTTCGATGGACTCCTGAGCTTCATCTCTCTTTTGTTCATGCTGTTGAAAGACTTGGCGGTCAAGAGAGAGCAACACCCAAGTTGGTGCTTCAGTTGATGAATGTGAGAGGGCTCAGCATTGCTCATGTCAAGAGTCACTTGCAGATGTACCGTAGCAAGAAACTTGACGAGACCGGCCAAGTATTAGGTCAAACATACAGATCGAGGCAATTGCATGAAGTAGTGGGACGTAGTAGAAATCATCATGAGTTACTCAATCCTCATCACCATTTCAAGATGGGAAACGGTGGCATTATTCTTGCAACCAATTTCAACCATCATCATCATTTCCAAGGTTCTCTGATGCCCCATCACCACCACCCCCACTTCTCCCTTTCATCACGTTCACATGCAATCGCCACCGACTCAGGGCAACATGAATTGTATTTGAATCATCAAGGATTGAGAGTAACAAGCAACGAAATTGTGTCCTCATCAAGTAATCATCAAGGAAGATCGAGTTCAAACCAGGTTCAAGTGATGGATACGTCTTGCAGAATTGCACCAATTAGACCAAGTCATTTCCTTGAAGAGAAGAAGTGGCCTCCCTTGGAAATTATGAACAATCATCATCAATGGAAGTTCAAGGGTCCTACTACTATTGGCAACATTCCTGAATCTGTTCAGCCAAGTATCAGAGAGTATTTATCAACCTCCAATAATAATTTAAGGCTAGAATTTGATCCTCCATTTCGGATAAAGTTGAATGAAGTGAAGAGGGAGAAAAGGGAGGAAAGGTTGCCCAATTTGCAACTAGGTTTGAGTCATGGCGGAGATGGAAGTGATGATGATTGCAGAGAAACACAAGAGATCAGCACTAAGCTTTCACTTTCATAG 1170 0.4154 MSKEYADEIIIEEDEETSSLGCCSQKCSSFDLNEEASSEEEEEEGGKNKKEEDEAACDEEEINANGTSNSREDERNNNNKNNERRGGVRQYVRSKMPRLRWTPELHLSFVHAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDETGQVLGQTYRSRQLHEVVGRSRNHHELLNPHHHFKMGNGGIILATNFNHHHHFQGSLMPHHHHPHFSLSSRSHAIATDSGQHELYLNHQGLRVTSNEIVSSSSNHQGRSSSNQVQVMDTSCRIAPIRPSHFLEEKKWPPLEIMNNHHQWKFKGPTTIGNIPESVQPSIREYLSTSNNNLRLEFDPPFRIKLNEVKREKREERLPNLQLGLSHGGDGSDDDCRETQEISTKLSLS* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0150 389 Pfam Myb-like DNA-binding domain 99 149 IPR001005 -
Ahy10g0150 389 MobiDBLite consensus disorder prediction 357 389 - -
Ahy10g0150 389 MobiDBLite consensus disorder prediction 65 90 - -
Ahy10g0150 389 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 1 314 IPR044848 GO:0003700
Ahy10g0150 389 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 328 389 IPR044848 GO:0003700
Ahy10g0150 389 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 1 314 - -
Ahy10g0150 389 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 328 389 - -
Ahy10g0150 389 MobiDBLite consensus disorder prediction 1 91 - -
Ahy10g0150 389 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 97 152 IPR006447 GO:0003677
Ahy10g0150 389 MobiDBLite consensus disorder prediction 18 32 - -
Ahy10g0150 389 SUPERFAMILY Homeodomain-like 95 151 IPR009057 -
Ahy10g0150 389 Gene3D - 96 153 - -
Ahy10g0150 389 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 93 153 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0150 Ahy-Chr10 1473209 1478892 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0150 88 158 G2-like Transcription Factor Family AT2G42660 77.465 1.02e-33 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Ahy10g0150 Myb_DNA-binding 2.70E-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0150 - - adu:107468251 693.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0339 20 3546822 3552136 Ahy10g0150 10 1473209 1478892 hybridization