Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0144 ATGAACCCCTTCTTTTACAGATTCTTGATTCTCCTTGCTCTGTTTTCTCTCGTGGAATCTTCTTCATCATGCAGCAGCAACAACAACAGAGACCACGAGCTTGTCTTAAAAGCCTTCCAATATGTCTCTGGATTCAAACCTTCATGGTTCCAAACAACACGCCAACCTTCTTCTTCTTCTTCCAACTGTTCGGTACAAGAGTCATCTCCCATTATTAAGAACATAGAGCTTCCTTCAAGAAACTTAAGCGGCAATATCTCATGGAGCTACCTAAAGAACATGTCAAACCTGCAAGTTCTCGATCTCTCCGGAAATTCCCTGCAAGGCCAAGTATCAAACATGTGGTGGGCAACTCCAAACTTGTTAGTAGTAAACCTCTCCAGAAACAGGTTCGGAGGAACCATTGCTTTCAACCAACTCACAACCGTTTCATCATCGCTTCAAGTTCTGAACCTCTCACACAACAGGCTCACCAATCAGGTTCACCTCTCCGGTTTCACAAACCTCAAAACCCTCGACCTTTCTCACAACCACCTTGGAACCTTACCTTCGGGTTTCCAGAGCCTCAAAAAACTCCAACACCTCGATCTCTCTAACTGCAACATCGAAGGACCAGTGAAACAAGTCTCTTCCCTTCACTCACTCACCTACCTCGACCTCTCTAACAACACGTTGAATGGAACCTTCCCTTCAGATTTCCCTCCATTGAACACCATCAAGTTCCTCAACATCTCACACAACAACTTCATCAAATCCACAGAACTAAGCCCAAACAAGTACAAGAAGTTCGGCCACTCGGCGTTCATAAACGCCGGCAACAACTTCCACTTGAACTTCAACGCAACCAACCTCCATTCAAAGAAGCAACACCACCAACCACCAATGCAACCAACTAATAACAAACACCACAGGCACAAGTCAAAACACAAAACCGTTTTGCTTGTGGCGGCATCGTGTGCCTCAGGGGTAGTTTTGGTATTGTCGTTGAGCGCGTGCATGTTACGGTGTTACTGTAGGAAGAAGGAAGAGGCGAAGAGGAACAAGTGGGCCATATCGAAACCTGTAGCGTTGACGAGCATCAAGATGGAGAAATCAGGGCCGTTCGCCTTCGAGACGGAGTCAGGGACGTCATGGGTGGCTGACCTGAAAGAACCGTCGTCGGCCGCCGTGGTGATGTTCGAGAAGCCGTTGATGAGTTTGACTTTCAAGGACTTGATGAGTGCCACGTCACACTTCGGTAAAGACTCACAGCTTGCTGAGGGTAGATGTGGGCCCGTGTACCGAGCTGTTCTACCAGGAGATATCCACGTGGCAATCAAGGTTTTGGAAAACGCAAGAGACGTTGATCACGATGACGCTGTCAACATCTTCGTTGACCTCTCCAGGCTGAAGCACCCTAACCTCTTGCCGCTCTCCGGTTACTGCATTGCAGGGAAGGAGAAGCTGGTGTTGTATGAGTTCATGTCAAACGGGGATTTAGGTAGGTGGTTACACGAGCTACCAACGGGTGACACCAACGTGGAAGATTGGAGTGGTGACACGTGGGAGATTCAAAACGGTATCGCGTCACATGAAAAGATGGCTTGGCCAACACGACACCGTATCGCCGTTGGTATGGCGCGTGGTCTCGCATTCCTCCACCACGCCGGATCCAGGCCTGTCGTTCACGGCCACATGGTAACATCTAATATTTTACTCTCTGATGACTTCGAACCACGAATCGCTGATTTCGGGTTGAGGAAATTCGGGCAGGAACAGAACGCGCCGAATTGCAGCACCGAGACTGACGTGTACTGCTTCGGTGTGGTGCTGATGGAGCTTCTGACGGGACGGCATGGCACGGCGGAGACAGTGGTGTCGGTGAGGAAGCTTGTTAGGGAGGGCCACGGTGTTCGCGCGTTGGATGAGAGGCTCGGATTCGGTGACTCAGAGGCTGAGATGGTGGAGAGCCTCCGAGTCGCGTACCTTTGCACCGCCGAGTCGCCGGCGAAGAGACCCACCATGCAGCAGGTCTTGGGTCTTCTCAAGGACATTCATCCGAGTGGCGGACTCGACTGA 2058 0.5034 MNPFFYRFLILLALFSLVESSSSCSSNNNRDHELVLKAFQYVSGFKPSWFQTTRQPSSSSSNCSVQESSPIIKNIELPSRNLSGNISWSYLKNMSNLQVLDLSGNSLQGQVSNMWWATPNLLVVNLSRNRFGGTIAFNQLTTVSSSLQVLNLSHNRLTNQVHLSGFTNLKTLDLSHNHLGTLPSGFQSLKKLQHLDLSNCNIEGPVKQVSSLHSLTYLDLSNNTLNGTFPSDFPPLNTIKFLNISHNNFIKSTELSPNKYKKFGHSAFINAGNNFHLNFNATNLHSKKQHHQPPMQPTNNKHHRHKSKHKTVLLVAASCASGVVLVLSLSACMLRCYCRKKEEAKRNKWAISKPVALTSIKMEKSGPFAFETESGTSWVADLKEPSSAAVVMFEKPLMSLTFKDLMSATSHFGKDSQLAEGRCGPVYRAVLPGDIHVAIKVLENARDVDHDDAVNIFVDLSRLKHPNLLPLSGYCIAGKEKLVLYEFMSNGDLGRWLHELPTGDTNVEDWSGDTWEIQNGIASHEKMAWPTRHRIAVGMARGLAFLHHAGSRPVVHGHMVTSNILLSDDFEPRIADFGLRKFGQEQNAPNCSTETDVYCFGVVLMELLTGRHGTAETVVSVRKLVREGHGVRALDERLGFGDSEAEMVESLRVAYLCTAESPAKRPTMQQVLGLLKDIHPSGGLD* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0144 685 PANTHER KINASE, PUTATIVE-RELATED 4 685 - -
Ahy10g0144 685 Pfam Protein tyrosine and serine/threonine kinase 415 584 IPR001245 GO:0004672|GO:0006468
Ahy10g0144 685 SUPERFAMILY L domain-like 68 288 - -
Ahy10g0144 685 ProSiteProfiles Leucine-rich repeat profile. 168 190 IPR001611 GO:0005515
Ahy10g0144 685 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 4 685 - -
Ahy10g0144 685 Gene3D Transferase(Phosphotransferase) domain 1 488 682 - -
Ahy10g0144 685 PRINTS Leucine-rich repeat signature 212 225 - -
Ahy10g0144 685 PRINTS Leucine-rich repeat signature 169 182 - -
Ahy10g0144 685 SUPERFAMILY Protein kinase-like (PK-like) 400 675 IPR011009 -
Ahy10g0144 685 Gene3D Ribonuclease Inhibitor 139 320 IPR032675 -
Ahy10g0144 685 ProSiteProfiles Leucine-rich repeat profile. 146 167 IPR001611 GO:0005515
Ahy10g0144 685 Pfam Leucine Rich Repeat 96 110 IPR001611 GO:0005515
Ahy10g0144 685 SMART LRR_typ_2 166 188 IPR003591 -
Ahy10g0144 685 SMART LRR_typ_2 94 117 IPR003591 -
Ahy10g0144 685 SMART LRR_typ_2 212 235 IPR003591 -
Ahy10g0144 685 Gene3D Phosphorylase Kinase; domain 1 372 487 - -
Ahy10g0144 685 Pfam Leucine rich repeat 146 202 IPR001611 GO:0005515
Ahy10g0144 685 Gene3D Ribonuclease Inhibitor 35 138 IPR032675 -
Ahy10g0144 685 ProSiteProfiles Protein kinase domain profile. 412 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0144 Ahy-Chr10 1396375 1399526 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0144 71 678 Receptor kinase-like Gene Family AT5G07280 30.711 1.78e-69 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Ahy10g0144 PK_Tyr_Ser-Thr 1.00E-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0144 - - gmx:100778920 917.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0332 20 3471943 3474805 Ahy10g0144 10 1396375 1399526 hybridization
Ahy13g4561 13 145998269 146001203 Ahy10g0144 10 1396375 1399526 PCT
Ahy3g4311 3 143140856 143143642 Ahy10g0144 10 1396375 1399526 PCT
Ahy10g0144 10 1396375 1399526 Ahy13g4561 13 145998269 146001203 PCT
Ahy10g0144 10 1396375 1399526 Ahy3g4311 3 143140856 143143642 PCT