Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0139 ATGGAAGGTGTCAAGTTGGTTGCTTGGTTCTTCTCCTTGTTTATTTTGTGTTCGATGCTAATGGTTGTTGAGGGTACTGATAGCCTTCTCTCTCCAAAGGGTGTCAACTGTGAAGTTGCTGCTTTGATGTCCATGAAGAATAAAATGAACGATGACTTGCACGTCTTGAATGGCTGGGATATTAATTCGGTTGACCCTTGCACTTGGAACATGGTTGGTTGCTCTGCCGAGGGTTATGTCATTTCCCTGGAAATGGCCAGTGCTGGTTTATCTGGAACTCTTTCGTCAGGAATTGGAAATTTGAGCCATCTCCGAACATTGTTACTGCAGAACAATCAGTTATCTGGTCCTATCCCGGCTGAGATAGGCAAGTTGTCAGAGCTTCAAACTCTAGACCTTTCCGGTAACCAGTTTGTTGGAGAAATTCCTAGTTCTTTGGGCTTATTGTCTCAACTAAGTTACTTGCGGCTCAGCAAAAATAATCTATCTGGACAGATCCCTCCACTTGTTGCTAACTTGACAGGCCTTTCATTCTTGGACTTGTCATTCAATAATCTCAGTGGTCCCACTCCAAAAATTTTGGCAAAAGGTTACAGTATTTCAGGAAATAACTTCCTTTGTACATCTCCTTCAGAACATTGTATGGACATTTCAAAACCACTAAACGGATCATCTCAGAAAGTCAAGAGTCATCACCAAAGGGTGATTTCTGTTGTTGTTGGCATCAGTTGCACATTTATAATTTCAGTGATGCTTGTATGTTGGTTGCATTGGTACAGATCGCGCATACTCTATACATCTTATGTGGAGCAAGATTGTGAATTTGATATTGGCCATTTGAAGCGGTTCACCTTCCGTGAACTACAAATTGCTACTGGAAATTTCACTCAAAAGAACATCCTTGGACAAGGAGGCTTTGGCATTGTCTACAAAGGATGCCTTACAAACAAAATGCTGGTGGCAGTGAAGAGGCTGAAAGATCCCAATTACACTGGAGAAATGCAATTTCAAACTGAAGTTGAGATGATCGGCTTGGCCGTGCATCGTAACCTCTTGCGTCTCTGTGGATTTTGTATGACTCCAGATGAAAGGTTACTTGTTTATCCCTACATGCCTAATGGCAGTGTTGCTGATCGCTTGAGAGACACATGCCGAGAAAAGCCATCTCTGGACTGGAACAGGCGAATGCGAGTTGCTGTTGGCGCTGCACGCGGGCTTCTGTATTTACACGAGCAGTGCAATCCTAAAATAATCCACAGAGATGTTAAGGCTGCAAACATTTTGCTAGATGAAAGTTTTGAAGCTGTGGTGGGGGATTTTGGCCTTGCTAAGCTGTTGGATCAAAGGGATTCGCATGTCACTACCGCCGTGCGTGGTACAGTAGGCCACATTGCCCCGGAGTATCTCTCCACTGGACAGTCTTCTGAGAAAACTGATGTTTTTGGATTTGGCATATTACTTCTGGAGCTCATAACAGGACAAAAGGCACTAGATGCTGGGAATGGTCAAGTACAAAAGGGAATGATTCTTGATTGGGTTAAGACATTATTTGAGGAGAAGCGGCTAGAAGTGTTAGTTGATAGGGATCTAAGGGGATGCTTTGATCCAGTTGAGTTAGAAATGGCAGTGGAGTTGTCTTTACAGTGCACTCAGTCACTTCCGAGTCTGCGGCCAAAGATGTCGGAAGTCTTGAAGATTCTAGAAGGCCTGGTTGGGCAGCCGGCGCCGCCGGAGGAGTCACAAGGAGGGTCTAACTTATATGAAGAAAGAGCATGCAGTTTCTCCCAAAATTATAGTGATGTTCATGAAGAACCTTCCTTTGTTATTGAAGCCATTGAGCTTTCTGGTCCTCGGTGA 1857 0.44 MEGVKLVAWFFSLFILCSMLMVVEGTDSLLSPKGVNCEVAALMSMKNKMNDDLHVLNGWDINSVDPCTWNMVGCSAEGYVISLEMASAGLSGTLSSGIGNLSHLRTLLLQNNQLSGPIPAEIGKLSELQTLDLSGNQFVGEIPSSLGLLSQLSYLRLSKNNLSGQIPPLVANLTGLSFLDLSFNNLSGPTPKILAKGYSISGNNFLCTSPSEHCMDISKPLNGSSQKVKSHHQRVISVVVGISCTFIISVMLVCWLHWYRSRILYTSYVEQDCEFDIGHLKRFTFRELQIATGNFTQKNILGQGGFGIVYKGCLTNKMLVAVKRLKDPNYTGEMQFQTEVEMIGLAVHRNLLRLCGFCMTPDERLLVYPYMPNGSVADRLRDTCREKPSLDWNRRMRVAVGAARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDQRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQKALDAGNGQVQKGMILDWVKTLFEEKRLEVLVDRDLRGCFDPVELEMAVELSLQCTQSLPSLRPKMSEVLKILEGLVGQPAPPEESQGGSNLYEERACSFSQNYSDVHEEPSFVIEAIELSGPR* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0139 618 SUPERFAMILY Protein kinase-like (PK-like) 279 579 IPR011009 -
Ahy10g0139 618 SUPERFAMILY L domain-like 38 209 - -
Ahy10g0139 618 SMART LRR_typ_2 101 124 IPR003591 -
Ahy10g0139 618 SMART LRR_typ_2 173 196 IPR003591 -
Ahy10g0139 618 SMART LRR_typ_2 125 149 IPR003591 -
Ahy10g0139 618 ProSitePatterns Protein kinases ATP-binding region signature. 301 323 IPR017441 GO:0005524
Ahy10g0139 618 Gene3D Phosphorylase Kinase; domain 1 265 370 - -
Ahy10g0139 618 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 14 618 - -
Ahy10g0139 618 Gene3D Ribonuclease Inhibitor 35 216 IPR032675 -
Ahy10g0139 618 ProSiteProfiles Protein kinase domain profile. 295 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy10g0139 618 Pfam Leucine rich repeat N-terminal domain 38 75 IPR013210 -
Ahy10g0139 618 Gene3D Transferase(Phosphotransferase) domain 1 371 572 - -
Ahy10g0139 618 Pfam Protein kinase domain 295 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy10g0139 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 417 429 IPR008271 GO:0004672|GO:0006468
Ahy10g0139 618 SMART serkin_6 295 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy10g0139 618 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 14 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0139 Ahy-Chr10 1365752 1369782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0139 43 618 Receptor kinase-like Gene Family AT5G45780 72.806 0.0 825
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Ahy10g0139 Pkinase 3.50E-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0139 - - gmx:100810610 1063.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0327 20 3433917 3437994 Ahy10g0139 10 1365752 1369782 hybridization