Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0112 ATGGTGGAAGGATATCTTGTTCCAAATATGATTAGCAATTCCAATCCATTAATGTTGATGATGGTATTAATACTGGTTGGCACGGGGCCGGGGATATGCCACGGTGAAGATGGGTGTGGAGGACACAGGTGCGGACGCCATGGCCCTCCGATTCGATTCCCATTCCGTCTTAAAGACAAGGAGCCCCCTCACTGCGGTTACCCTGCCTTTGATCTCACTTGTTCTGATTCTCATGACACCTTCATTGAGTTCTCTGCTTCTCCTGTCCCACTTAAGCTCCTTGTCACTGATATCCAATATGAATATAACTATTTCCGAGTCTCTGACACGCAAAATTGCCTTCCCACCCACTTGCTCAAACTCATCAAAAATTCTTCCTCAATTTCTCCTTTCCAGTTCAGTCCGGATCAGAGTCTGAACCAGATATCTTTCTTCAATTGTTCACCTGATCCGCAATATCAACTCTCCTGCCCCATTTACGTTGCTGACAGCTACGATTCACTCCTCAATTCCAATCTCGTATCTTGCACCAAGATTTTTGACATTTTTTCAACCTTCTATGTCTCAGAAATGGTAGATTTGTACAATACTTTGAATTTGTGGTGGTCGAAACCTAATTGTAGCATGTGTGAAATACAAGGCAAGAGATGTAAACTGAAGAACAATGGCACTCAAGGTGAAGTTGAGTGCTTCCGCCACCATCATAATAACTTGCTCTTTGGCTCCACAGGTGTTGTGGCAGGTTTAATTCTGCTGGCAGCAGTGGCTACTGCAGTGTTTAAGATCTATCAACATTTTAGAATGAAAGGAGAAGATCGAGCAAGAATTGACAAGTTCTTGGAAGATTACAGGGCACTCAAGCCTACCAGATTCTCTTATGCTGATATAAAGAGGATCACAAATGGTTTCAAGGACAAGCTGGGTGAAGGAGGTCATGGAGCAGTCTTCAAGGGCATGCTCTCCTCAGAAATCGGCGTAGCTGTGAAAATACTCAACAGCAACACGGAGGGTGAAGGGAAAGATTTCACCAACGAGGTGGGAACCATGGGCAAAATTCACCATGTCAATGTGGTTCGCTTACTTGGCTTTTGTGCGCAAGGATTTCATTGTGCTCTAGTTTATGATTTCTTTCCAAAAGGTTCATTGCAAAACTTCATATCCACGCCAGATAACAAGGACTTCTTCCTTGGATGGGAGAAGCTTCACCAAATTGCCCTTGGTGTTGCTAGAGGCATTGAGTATCTTCACCATGGTTGTGAGCAACAGATCCTTCATTTTGACATCAATCCCCACAATATCTTACTTGATGACAACTTCACTCCCAAGATTACTGATTTTGGGCTTGCCAAGTTGTGTTCCAAAGATCAGAGCAAAGTTTCAATGACCGCAGCCAAGGGAACCATGGGCTACATTGCGCCTGAAATTGTCTCAAGAAACTTTGGAAATGTGTCTTACAAAGCAGACATTTATAGCTATGGGATATTGTTGCTTGAAATGGTAGGAGGAAGGAAAAACATAGAGATGGAAGTTGAGGGGTCTTTAAGGATTTTATACCCCGAATGGGTGCATAATTTGCTTGATGGGGGAGATTTTCATGTACACATTGAAGATGAGAAAGACAATAAACTTGCAAAGAAAATTGCAATTGTTGGACTACAATGCATTCAGTGGCAGCCATCAGATCGTCCTTCCATCAAAACTGTCATAAGTATGTTAGAAGGAGATGCAGACAAATTAAGTGTACCTCCTAATCTTTTCGACTTAACAAATTCTATTAGCAGAGGACGACGAATAACCAACCAGATAAGGCCTTTAAATTTAGAGTTGGAGAGGATTGAAGAATCAGATCATTGTCAAACAAGTTCTTTCTAA 1872 0.4231 MVEGYLVPNMISNSNPLMLMMVLILVGTGPGICHGEDGCGGHRCGRHGPPIRFPFRLKDKEPPHCGYPAFDLTCSDSHDTFIEFSASPVPLKLLVTDIQYEYNYFRVSDTQNCLPTHLLKLIKNSSSISPFQFSPDQSLNQISFFNCSPDPQYQLSCPIYVADSYDSLLNSNLVSCTKIFDIFSTFYVSEMVDLYNTLNLWWSKPNCSMCEIQGKRCKLKNNGTQGEVECFRHHHNNLLFGSTGVVAGLILLAAVATAVFKIYQHFRMKGEDRARIDKFLEDYRALKPTRFSYADIKRITNGFKDKLGEGGHGAVFKGMLSSEIGVAVKILNSNTEGEGKDFTNEVGTMGKIHHVNVVRLLGFCAQGFHCALVYDFFPKGSLQNFISTPDNKDFFLGWEKLHQIALGVARGIEYLHHGCEQQILHFDINPHNILLDDNFTPKITDFGLAKLCSKDQSKVSMTAAKGTMGYIAPEIVSRNFGNVSYKADIYSYGILLLEMVGGRKNIEMEVEGSLRILYPEWVHNLLDGGDFHVHIEDEKDNKLAKKIAIVGLQCIQWQPSDRPSIKTVISMLEGDADKLSVPPNLFDLTNSISRGRRITNQIRPLNLELERIEESDHCQTSSF* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0112 623 Pfam Protein kinase domain 304 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy10g0112 623 PANTHER RUST RESISTANCE KINASE LR10-RELATED 28 612 IPR045874 GO:0004672
Ahy10g0112 623 Gene3D Phosphorylase Kinase; domain 1 277 376 - -
Ahy10g0112 623 ProSitePatterns Protein kinases ATP-binding region signature. 307 329 IPR017441 GO:0005524
Ahy10g0112 623 ProSiteProfiles Protein kinase domain profile. 301 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy10g0112 623 Gene3D Transferase(Phosphotransferase) domain 1 377 581 - -
Ahy10g0112 623 PANTHER RECEPTOR-LIKE KINASE 28 612 - -
Ahy10g0112 623 Pfam Wall-associated receptor kinase galacturonan-binding 39 109 IPR025287 GO:0030247
Ahy10g0112 623 SUPERFAMILY Protein kinase-like (PK-like) 284 573 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0112 Ahy-Chr10 1191362 1193883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0112 240 583 Receptor kinase-like Gene Family AT1G66910 43.590 2.77e-95 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Ahy10g0112 Pkinase 1.50E-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0112 - - aip:107619931 1179.08