Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0099 ATGGATGAAGTTCAGGGAAGTTCAAGTTCCTTACCTCCATTTCTCACAAAGACATATGAGATGGTGGATGATCCTTCCACCAATTCCATTGTATCATGGAGTGACAGCAGCAGGAGTTTTGTTGTTTGGAATCCACCAGAGTTTGCAAGGGTCTTGTTACCAAAATTCTTTAAGCACAATAACTTCTCAAGCTTTATCAGACAGCTCAACACTTATGGCTTTAAGAAGATTGACCCTGAACAATGGGAATTTTCCAATGATGATTTTGTAAGAGGTCAACCAAATCTTATGAAGAATATTCATAGGCGCAAACCGGTTCATAGCCATTCTTTGCAGACTCTACATGGACAAGTGGCTATTCCGCTAACCGAGTCAGAACGGAAGAGTCTGAAAGATGAGATTGAAAAGCTTAAGCATGATAAACAACAACAGATTCTGGAGTTACAGAGACAAGAACAAGAGTGGGAAAATTTTAAGTTAAAAATAGATTGCACAAAGGAGCGTTTGGAAACAATGGAAAAGAGGCAACAAAATATGATTTCTTCTATTTCTCAAGTGCTGCATAAACCTGGGGCTGCATTAAATCTGTTGACACTGACAGAAAACATGGAAAGAAAACGAAGGTTGCCAAAAGGCAGCAGTCACTTTACTGATGAAGCTAGCATTGAAGATCCTATGGAAATATCCCAAGTGTTACCTAGTGAAAATGCAGAGAGTAGTGACTTCGTCACATCATGCATAGAACGAATGAATCAGCTCGAGTCAACCCTGGTATTTTGGGAATATATTGCACAAGATGTGAATGAAACCCTTGTTCAAAGTCATTCAAACTTGGATGTTGATGAATCCACAAGTTGTCCAGACAGTCCAGCACTATCTAGTGTGCAACTCGATGATGAAGTTCAGCCTAAGTCATCCGGGATAGACATGAATTCTGAGCCAGCTTTACCTTCTGATACTGTTGCATTGAAGGAACAACCTGTTGGAACTACCCCTGCAGCTACTGGTGTTAACGACAAATTCTGGGAACAATTCTTGACAGAGAATCCTGGTTCAACAGAACTGCAAGAGGCACAATCAGAAAGAATGGATTCGGACAACAGAAAGAATGAAGGAAAGCCTAGTGCACATGGCAAGTTTTGGTGGAACATGAGGAATGTAAATAATCTTCCAGAACAGATGGGTCATTCTTAG 1194 0.4045 MDEVQGSSSSLPPFLTKTYEMVDDPSTNSIVSWSDSSRSFVVWNPPEFARVLLPKFFKHNNFSSFIRQLNTYGFKKIDPEQWEFSNDDFVRGQPNLMKNIHRRKPVHSHSLQTLHGQVAIPLTESERKSLKDEIEKLKHDKQQQILELQRQEQEWENFKLKIDCTKERLETMEKRQQNMISSISQVLHKPGAALNLLTLTENMERKRRLPKGSSHFTDEASIEDPMEISQVLPSENAESSDFVTSCIERMNQLESTLVFWEYIAQDVNETLVQSHSNLDVDESTSCPDSPALSSVQLDDEVQPKSSGIDMNSEPALPSDTVALKEQPVGTTPAATGVNDKFWEQFLTENPGSTELQEAQSERMDSDNRKNEGKPSAHGKFWWNMRNVNNLPEQMGHS* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0099 397 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-4C 1 384 - -
Ahy10g0099 397 MobiDBLite consensus disorder prediction 349 380 - -
Ahy10g0099 397 SMART hsfneu3 10 103 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy10g0099 397 Coils Coil 120 168 - -
Ahy10g0099 397 MobiDBLite consensus disorder prediction 279 315 - -
Ahy10g0099 397 Pfam HSF-type DNA-binding 14 103 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy10g0099 397 MobiDBLite consensus disorder prediction 279 313 - -
Ahy10g0099 397 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 1 384 IPR027725 -
Ahy10g0099 397 PRINTS Heat shock factor (HSF) domain signature 52 64 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy10g0099 397 PRINTS Heat shock factor (HSF) domain signature 65 77 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy10g0099 397 PRINTS Heat shock factor (HSF) domain signature 14 37 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy10g0099 397 ProSitePatterns HSF-type DNA-binding domain signature. 53 77 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy10g0099 397 MobiDBLite consensus disorder prediction 359 375 - -
Ahy10g0099 397 SUPERFAMILY "Winged helix" DNA-binding domain 9 103 IPR036390 -
Ahy10g0099 397 Gene3D - 6 104 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0099 Ahy-Chr10 1025537 1027611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0099 7 396 HSF AT4G18880 53.000 7.94e-120 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Ahy10g0099 HSF_DNA-bind 2.40E-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0099 K09419 - gmx:100820566 551.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0289 20 3018785 3020863 Ahy10g0099 10 1025537 1027611 hybridization
Ahy13g4591 13 146252733 146255115 Ahy10g0099 10 1025537 1027611 PCT
Ahy3g4338 3 143374611 143376964 Ahy10g0099 10 1025537 1027611 PCT
Ahy10g0099 10 1025537 1027611 Ahy13g4591 13 146252733 146255115 PCT
Ahy10g0099 10 1025537 1027611 Ahy3g4338 3 143374611 143376964 PCT