Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0088 ATGCAACTTCTCAACTTCTTTGGCTTCTTACTTGTTACACTTTGTTGCTTCCAGTTGCTGAGAATATCCGAATCAAAATTGCCAAAAGAAGAAGTTGAAGCTCTCAAAGAAATTACCAGTACAATGGGGGCGGTCTATTGGGAGTTCGATAATGATTCCTGTGACATTATAAGGGTTGGACTAACGCAAGAACCTCCTGACGAATCGGAGAGAAGCATTGTTTGTGACTGCAGTTTTGAAAATAGTACTGTCTGTCATGTTACTAAGATAACCCTCAAGCGCCTTAGTCTACCTGGAGCACTCCCACCTCAACTGGTCAAGCTACCTTTTCTTCAAGATATAGATTTTGCATACAATTGTTTAAATGGCACAATTCCAAAGGAATGGGCTTCAATGAATTTAACTTCCATCTCTCTTCTTGTGAATCGCTTGTCAGGGGAAATTCCAAAGCATCTAGGAAATATTACTACTCTCACATACCTGATGCTGGAAGCAAACAATTTTTCTGGAGTTGTTCCACCTGAACTTGGGAAGCTGATCAACTTGCAGACCTTGGTACTGTCATCAAATCAGTTGACCGAGAACTTACCATCGGCACTTGCTGGGCTGCAAAATTTAACAGACTTTAGGATAAGTAGTAACAACTTTACAGGAACCATACCTGATTTCATAAAGAACTGGCAATTTCTCCAAAGACTAGAAATGCATGGAAGTGGACTAGAAGGACCGATTCCTTCGAGTATATCTCTATTGAAGAACTTACTTCAGTTAAGAATCAGTGATATAAAAAGTCCTAGCCAGGTTTTTCCTTCACTGCAGAGCATGACAGCACTAACTACATTGGTTTTAAGGAACTGTAACCTGTCTGGGGAGATACCTTCATACATATGGACCTTGACAAATCTAGCAACTTTGGATGTCAGTTTTAACAAGCTAGTTGGGAAAATTCCCGAAGTCATTAATGTAAAGCGTATGAGATACATCTACCTAACAGGTAACATGCTCAGTGGAAATGTACCAAAGTCAATACTGAAGGATGGAAGTAGCATTGATCTCTCTTACAACAACTTTACTTGGCAAGGGCCTGAGCAACCTGCTTGTCAGGAAGACATAAGCTCAATGATGAAGAATAAGTTAGAGGAATATGTGCCTTGCCAAATTAACTTCAATTGTCCACGATATTCAAGTTGCTTACATGTCAATTGTGGTGGAAAGGATATACAAGTAAAAGATAATAAAGGAAACAGCCTCTATTTTGGAGATGGAGAAGTTGCAGGTGGTACTGCAACATATTTCTATAGCTCCAGTGGTCAATGGGGATTTAGTAGCACTGGGGACTTTCTGGATGATTTCGAAGCTCAGAACATACGTTACACTGTATCTCTATCATCTTCAAATATGTCTGAATTGTACACAACAGCACGCATATCTCCAATTTCACTCACTTACTTCCATAATTGCATGGAAAATGGGAACTATACTGTAAATCTTCACTTTGCTGAAATACAGTTTTCAAATGATAACACATATAAAAGCCTTGGGAAGCGTATATTTGATATCTATGTTCAGGAAAAATTGATTAGAAAGGATTTTGATATAGAAAATGAGACACATGCTGCTGTAAAACCACTGGTAGTGCCTATATACAATGTCAGCATCACAAATAATGTTTTGGAGATTAGATTCTACTGGGCCGGGAAAGGAACAACTCGAATACCTGATTATGGAGTTTATGGTCCCCTTGTATCAGCATTGTCTGTTGTTTCTGACTCTAGAACTTGCTCAAACGATGGAAAGAAGGTTCCTGTTTCTGTAATAATTGCAAGTGTAGCTGGGGCTCTATGCTTCATTCTTCTTTTGTTTGGATTCATTTGGTGGAAAGGCTTTTTCAGAAGAAAATTGCGACGGAAAGGTACAAAAGGTGGAGATATTCAGTCAGGAACTTTTAGCTTAGAGCAGCTGAGAGCAGCCACTGATGACTTTTCTTCTGTTAACAAGATTGGAGAAGGCGGTTTCGGTCCTGTATACAAGGGTCAACTGCCTGATGGTACTGTTATAGCAGTTAAGCAACTATCATCAAAGTCAAGGCAAGGAAATCGCGAATTCTTAAATGAAATAGGCTTGATATCTTGTTTGCAACATCCCAACCTTGTAAAGCTTTATGGATACTGCACAGAAGGGGAACAACTTCTATTAGTATATGAGTACCTGGAAAATAATAGTCTTTCCCGTGCTTTATTTGGTAGTGAAACCAATCATCTTAAGATAGACTGGCCAACAAGGTTTAGGATCTGCATTGGCATAGCAAAGGGTCTGGCATTTCTCCATGAAGAATCAAGATTCAAGATAGTTCACAGAGATATCAAGGCTTCTAATGTGTTACTTGATGGTGAACTAAATCCTAAGATATCTGACTTTGGATTGGCTAAGCTTCATGAAGATGAGAAGACACATATAAGTACCCGAGTTGCCGGCACTATTGGATATATGGCACCAGAATATGCACTATGGGGCTATCTTACATACAAAGCTGATGTTTACAGCTTTGGGGTTGTGGCCTTAGAAATTGTTAGCGGAAAAAGCAACAACAATTATTTACCAGATGATGAAAGCGTTTGCCTTTTGGATTGGGCTTGCCAATTGCACAAAAAACAGAACTTGGTTAAACTGATTGATGAAAGCTTGGGGCCAGAGGACATTATAACAGAAGCAGAAATGGTGGTAAAAGTATCACTACTATGCACAAATGCATCACCATCACTCAGACCTACAATGTCTGAGGTTGTGAATATGCTTGAAGGTCGTGCAGCTATTCCGGATATGGTTCCAGATCCAAGTTCCTGCAATGAGGATTTGAGGTTTAAAGCTTTAAGAGACTTCCATCAACATAAACCAAAACTGGGTTTGAGTGTAAACCAGACCCCAAATTCAGCAACACCACATACATTCAGCTCAATATCTGGTGATAATAATTACACAAGTTCTATTGAGGAATTAGCTCATTCTGAGATTTCCCCTTTATCAAGTTAA 3030 0.3927 MQLLNFFGFLLVTLCCFQLLRISESKLPKEEVEALKEITSTMGAVYWEFDNDSCDIIRVGLTQEPPDESERSIVCDCSFENSTVCHVTKITLKRLSLPGALPPQLVKLPFLQDIDFAYNCLNGTIPKEWASMNLTSISLLVNRLSGEIPKHLGNITTLTYLMLEANNFSGVVPPELGKLINLQTLVLSSNQLTENLPSALAGLQNLTDFRISSNNFTGTIPDFIKNWQFLQRLEMHGSGLEGPIPSSISLLKNLLQLRISDIKSPSQVFPSLQSMTALTTLVLRNCNLSGEIPSYIWTLTNLATLDVSFNKLVGKIPEVINVKRMRYIYLTGNMLSGNVPKSILKDGSSIDLSYNNFTWQGPEQPACQEDISSMMKNKLEEYVPCQINFNCPRYSSCLHVNCGGKDIQVKDNKGNSLYFGDGEVAGGTATYFYSSSGQWGFSSTGDFLDDFEAQNIRYTVSLSSSNMSELYTTARISPISLTYFHNCMENGNYTVNLHFAEIQFSNDNTYKSLGKRIFDIYVQEKLIRKDFDIENETHAAVKPLVVPIYNVSITNNVLEIRFYWAGKGTTRIPDYGVYGPLVSALSVVSDSRTCSNDGKKVPVSVIIASVAGALCFILLLFGFIWWKGFFRRKLRRKGTKGGDIQSGTFSLEQLRAATDDFSSVNKIGEGGFGPVYKGQLPDGTVIAVKQLSSKSRQGNREFLNEIGLISCLQHPNLVKLYGYCTEGEQLLLVYEYLENNSLSRALFGSETNHLKIDWPTRFRICIGIAKGLAFLHEESRFKIVHRDIKASNVLLDGELNPKISDFGLAKLHEDEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKSNNNYLPDDESVCLLDWACQLHKKQNLVKLIDESLGPEDIITEAEMVVKVSLLCTNASPSLRPTMSEVVNMLEGRAAIPDMVPDPSSCNEDLRFKALRDFHQHKPKLGLSVNQTPNSATPHTFSSISGDNNYTSSIEELAHSEISPLSS* 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0088 1009 Gene3D Transferase(Phosphotransferase) domain 1 737 940 - -
Ahy10g0088 1009 SUPERFAMILY L domain-like 81 341 - -
Ahy10g0088 1009 SUPERFAMILY Protein kinase-like (PK-like) 646 933 IPR011009 -
Ahy10g0088 1009 Gene3D Phosphorylase Kinase; domain 1 632 736 - -
Ahy10g0088 1009 Gene3D Ribonuclease Inhibitor 196 392 IPR032675 -
Ahy10g0088 1009 Pfam Protein tyrosine and serine/threonine kinase 664 932 IPR001245 GO:0004672|GO:0006468
Ahy10g0088 1009 Gene3D Ribonuclease Inhibitor 62 195 IPR032675 -
Ahy10g0088 1009 MobiDBLite consensus disorder prediction 966 990 - -
Ahy10g0088 1009 SMART serkin_6 661 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy10g0088 1009 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 71 954 - -
Ahy10g0088 1009 CDD STKc_IRAK 667 934 - -
Ahy10g0088 1009 MobiDBLite consensus disorder prediction 967 990 - -
Ahy10g0088 1009 ProSiteProfiles Protein kinase domain profile. 661 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy10g0088 1009 PANTHER SERINE-THREONINE/TYROSINE-PROTEIN KINASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 71 954 - -
Ahy10g0088 1009 ProSitePatterns Serine/Threonine protein kinases active-site signature. 783 795 IPR008271 GO:0004672|GO:0006468
Ahy10g0088 1009 Gene3D - 395 592 - -
Ahy10g0088 1009 Pfam Leucine rich repeat 157 216 IPR001611 GO:0005515
Ahy10g0088 1009 Pfam Malectin domain 397 585 IPR021720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0088 Ahy-Chr10 967974 974905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0088 4 827 Receptor kinase-like Gene Family AT1G29750 57.812 0.0 1002
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy10g0088 PK_Tyr_Ser-Thr 7.00E-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0088 - - qlo:115990047 1378.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0278 20 2944606 2951503 Ahy10g0088 10 967974 974905 hybridization
Ahy13g4595 13 146319832 146326491 Ahy10g0088 10 967974 974905 PCT
Ahy3g4342 3 143426159 143433505 Ahy10g0088 10 967974 974905 PCT
Ahy10g0088 10 967974 974905 Ahy13g4595 13 146319832 146326491 PCT
Ahy10g0088 10 967974 974905 Ahy3g4342 3 143426159 143433505 PCT