Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0086 ATGGCAACAAGTTCAAGTTCAAGTTCAAGATCAAGCAACAATGGCAAAGCCATAGGAATTGATCTTGGCACAACCTACAGCTGTGTTGCAGTGTGGCAAAACAACCACGTTGACGTCATTCCAAACGAACAAGGCAACCGCACCACTCCTTCTTGCGTTTCATTCACTGACACTCAAAGATTACTAGGCGATGCCGCCATTAACCAACTCTCCTTGAATCCACTCAACACTGTCTTCGATGCCAAACGCTTGATCGGTCGCAGGTTCAACGACCACTCAGTTCAAGAGGACATGAAGCTGTGGCCTTTTAAGGTTGTCCCTGATCCTAACAACAACAACAAACCACTCATTCTTGTTAACTATAAGTGTGAAGAGAGATACCTTGCACCTGAAGAGGTGTCTTCCATGGTGCTCTTCAAGATGAAGGAGGTTGCTGAAGCTTACTTAGGCCATTCTGTGAAGAATGCAGTCATCACTGTCCCTGCTTACTTCAACAACTCTCAGAGACAAGCCACCAAAGACGCCGGAAAAATCGCGGGCCTTAACGTTATGAGGATCATAAACGAGCCTACTGCTGCTGCCATTGCTTATGGCTTCGACAAGAAGAGTTGGAGGGAAGGTGAGAAGAATGTGCTTGTGTTTGATCTTGGTGGTGGCACTTTCGATGTTTCATTGGTAACAATTGATGAAGGGATGTTCAAGGTGAAGGCCACTTTGGGAGACACACATTTGGGAGGTGAAGATTTTGATAACAAAATGGTGAACCATTGTGTTGAATTGGTGAAAGGAAGGTACAAGAAGGACATTAGTGGGAATGCGAAAGCTTTGAGGAGGTTAAGGTCACATTGTGAGAGGGCCAAGAGGAATCTCTCTTCCATTTCACAAACAAGAATCGAAATCGATGCTTTGCACGAAGGGATTGATCTTTACCTCACTGTTACTAGAGCTGCATTTGAGGAATTGAACAAGGACTTGTTCAAGAAGTGCATGGAGACAGTGGAAAAATGCCTAATTGAGGCTAAGGTTGACAAAAGCCAAGTACACGAGATTGTTCTTGTTGGTGGCTCTACTAGAATTCCGAAAGTTCAGCAACTCTTGAAGGAGATGTTCTGTGTCAATGGTATGGTTAAAGAGCTTTGCAAAAGCATCAATGCCGATGAGGCCGTGGCGTATGGTGCTGCGGTTCAGGCAGCCATATTGAGTGGTGAAAGAGACAAGAACGTGGAGGAGCTCTTGTTGCTTGATGTGTTGCCGCTAAGCCTTGGAATTGAAGCTTCCGGTGGAGCCATGTCGGTTTTGATTCCTAAGAATACCATGATTCCCACCAAAAAAGAGAGGGTTTTTTATCCTTCATATGAGGATCAAAGCAGTGTTATGATCAAAGTGTTTGAAGGAGAAGAACCAAAAACAAAAGATAATGTCTTCCTCGGGAAGCTTGAGCTCCAAGCACCAAGAGGAACCTCACAGATCAATGTTTGCTTCGATATAAACATCGATGGCATTCTTGAGGTCACGGCTGAAGACAAAAGTTCGAGGGTGAAGAAAACGATCAAGATCAACCACAGGAATGGAAGGTTGAGGCCAGACGAGTTGAAGAGAATGGTGAGAGATGCAGAGAAGTTTAAGGAAGATGATGAGGAAGTAAAGAAGAAGGAGAAGGCAAAGAACTCGCTTGAAAACTATGCATATGAAATGAAGCAAAAATTGAAGAATCTAGAGAAGAAAATTGAGGAGGCAATAGAATGGTTAGAGAGGAACCAGTTAGCAGAAGCAGAGGAATTTGATTTCAGGAAGCAAGAACTGGAAGATGATCTGAAATCAGATTTTGTATCTAATGTTGTTCCAAACCCTGATGAGTCCAAGGTTCCAATATGGTGTACTTGGAGGGTTCCACCAAGTGGTTGGGTTTGTCTCAACACCGATGGTTCAGTGTTTCAGAACAGAAACAATAACAACAAAGCAGCATGTGGGGGTCTAGTTCGAGATTCCTCGGGTAGTTTCCTAGGTGGTTTTTCTGTTAAGCTAGATCATGCCACGTCAGTTACAATGGCAGAGTTGTGGGGTGTTGTTCATGGACTCAATCTGGCTTGGGATCTTGGGTGTAGAAAAGTGAAGGTGGATATTGATTCTGGAAATGCTCTTGCATTGGTGAGGAATTGTCCTGTGGCTAATGATCCTGCATTTGGGTTGGTTTCTGAGATTAATGCACTTGTGAGAAGGGATTGGTTGGTGGAATTCTCTCATATACTTAGAGAATCTAATCGTGCTGCTGATAAAATGGCTCATTTGGGACTCACTTTGGATTCGGGTCTTAGTGTGAAGCGATTCATGGAGGCACCCACTGCTGTTATTGACATTCTTAATGATGATGTTGCTGGTGTTCCTTTACAACGTGGTGTTCATGCCCGTTAG 2412 0.4391 MATSSSSSSRSSNNGKAIGIDLGTTYSCVAVWQNNHVDVIPNEQGNRTTPSCVSFTDTQRLLGDAAINQLSLNPLNTVFDAKRLIGRRFNDHSVQEDMKLWPFKVVPDPNNNNKPLILVNYKCEERYLAPEEVSSMVLFKMKEVAEAYLGHSVKNAVITVPAYFNNSQRQATKDAGKIAGLNVMRIINEPTAAAIAYGFDKKSWREGEKNVLVFDLGGGTFDVSLVTIDEGMFKVKATLGDTHLGGEDFDNKMVNHCVELVKGRYKKDISGNAKALRRLRSHCERAKRNLSSISQTRIEIDALHEGIDLYLTVTRAAFEELNKDLFKKCMETVEKCLIEAKVDKSQVHEIVLVGGSTRIPKVQQLLKEMFCVNGMVKELCKSINADEAVAYGAAVQAAILSGERDKNVEELLLLDVLPLSLGIEASGGAMSVLIPKNTMIPTKKERVFYPSYEDQSSVMIKVFEGEEPKTKDNVFLGKLELQAPRGTSQINVCFDINIDGILEVTAEDKSSRVKKTIKINHRNGRLRPDELKRMVRDAEKFKEDDEEVKKKEKAKNSLENYAYEMKQKLKNLEKKIEEAIEWLERNQLAEAEEFDFRKQELEDDLKSDFVSNVVPNPDESKVPIWCTWRVPPSGWVCLNTDGSVFQNRNNNNKAACGGLVRDSSGSFLGGFSVKLDHATSVTMAELWGVVHGLNLAWDLGCRKVKVDIDSGNALALVRNCPVANDPAFGLVSEINALVRRDWLVEFSHILRESNRAADKMAHLGLTLDSGLSVKRFMEAPTAVIDILNDDVAGVPLQRGVHAR* 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0086 803 ProSitePatterns Heat shock hsp70 proteins family signature 2. 213 226 IPR018181 -
Ahy10g0086 803 Gene3D - 18 398 - -
Ahy10g0086 803 PANTHER HEAT SHOCK PROTEIN 70KDA 13 613 IPR013126 GO:0005524|GO:0140662
Ahy10g0086 803 SUPERFAMILY Ribonuclease H-like 634 761 IPR012337 -
Ahy10g0086 803 Gene3D - 79 136 - -
Ahy10g0086 803 CDD RNase_H_like 638 762 IPR044730 -
Ahy10g0086 803 Pfam Reverse transcriptase-like 639 762 IPR002156 GO:0003676|GO:0004523
Ahy10g0086 803 Pfam Hsp70 protein 17 602 IPR013126 GO:0005524|GO:0140662
Ahy10g0086 803 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 407 559 IPR029047 -
Ahy10g0086 803 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 554 603 IPR029048 -
Ahy10g0086 803 Coils Coil 551 592 - -
Ahy10g0086 803 SUPERFAMILY Actin-like ATPase domain 16 201 IPR043129 -
Ahy10g0086 803 ProSitePatterns Heat shock hsp70 proteins family signature 1. 20 27 IPR018181 -
Ahy10g0086 803 Gene3D - 635 766 IPR036397 GO:0003676
Ahy10g0086 803 Gene3D Actin; Chain A, domain 4 246 328 - -
Ahy10g0086 803 Coils Coil 276 296 - -
Ahy10g0086 803 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 405 554 IPR029047 -
Ahy10g0086 803 PRINTS 70kDa heat shock protein signature 219 229 - -
Ahy10g0086 803 PRINTS 70kDa heat shock protein signature 383 403 - -
Ahy10g0086 803 PRINTS 70kDa heat shock protein signature 44 56 - -
Ahy10g0086 803 PRINTS 70kDa heat shock protein signature 16 29 - -
Ahy10g0086 803 PRINTS 70kDa heat shock protein signature 487 503 - -
Ahy10g0086 803 PRINTS 70kDa heat shock protein signature 66 74 - -
Ahy10g0086 803 PRINTS 70kDa heat shock protein signature 410 429 - -
Ahy10g0086 803 PRINTS 70kDa heat shock protein signature 156 176 - -
Ahy10g0086 803 Gene3D - 555 607 IPR029048 -
Ahy10g0086 803 ProSiteProfiles RNase H type-1 domain profile. 632 766 IPR002156 GO:0003676|GO:0004523
Ahy10g0086 803 Gene3D - 202 380 - -
Ahy10g0086 803 PANTHER SHOCK PROTEIN, PUTATIVE-RELATED 13 613 - -
Ahy10g0086 803 SUPERFAMILY Actin-like ATPase domain 206 402 IPR043129 -
Ahy10g0086 803 ProSitePatterns Heat shock hsp70 proteins family signature 3. 350 364 IPR018181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0086 Ahy-Chr10 962727 965746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0086 16 602 Calmodulin-binding Proteins AT1G16030 65.785 0.0 817
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0086 K03283 - gmx:100795699 1078.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0276 20 2939192 2942325 Ahy10g0086 10 962727 965746 hybridization