Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy10g0042 | ATGGCTTTTGAGCCATTGGATTGGTATTGTCAGCCAGTTGCAAATGGAGTATGGACCACAACAGTTGACAATGCCTTTGGAGCTTACACTCCTTGCGCGGTTGATTCTTTGGTGATCTCCGTTTCTCATTTGGTGCTTCTAGGCCTGTGTGTCTACCGGATATGGTTGATTAAGAAGGATTTCAAAGCCAAAAGGTTCTGCTTACGGTCAAAACTCTATAATTATTTGCTTGGGTTGTTAGCTTTGTATTGTGTGGCCGAGCCCTTATATAGATTGATTGCTGGACTATCAATTCTAAATTTAGATGGTCAGACTCAACTTGCTCCATTTGAGATCACTTCACTGGTCATTGAAGTTCTTACTTGGGGTGCTATGCTGATTTTGATTGGCGTCGAGACTAAAGTTTACATTTACGAATTCAGATGGTTTATCCGATTTGGTTTGCTGTATTCTATTGTCGGGGATACTGTCATGCTCAACCTTATCATTTCTGTGCAGGAGTTGTATAGCAGGTCAGTGCTGTATTTGTACATAAGCGAGGTGGTCTGCCAGGCTTTGTTTGGACTACTTTTGCTTGTGTATATACCTACTTTGGATCCTTATCCGGGTTCTACCCCTGTTCGGAGTGACTTGGTTGTTGATACTGCATATGAAGAACTGCACGGAGGAGAGCAGATATGTCCTGAAAGGCATGCAAACATATTGTCAAGAATCCTTTTTTCTTGGATGAATCCTATCATGAATCTAGGATATCAAAGACCCCTTACAGAGAAAGATATATGGAAGTTAGATACATGGGATCGGACTGAGACACTGAATGAAAAGTTCCAGAGATGTTGGGTAGAAGAATCTCGGAGGTCGAAACCTTGGCTTTTAAGAGCATTGAATGCAAGCCTTGGTGGGAGGTTTTGGTGGGGAGGATTTTGGAAGATTGGAAATGATCTCTCCCAGTTTTTGGGCCCACTAATATTGAATCAGCTGCTAGAGTCTATGCAAAATGGTGATCCAGCCTGGATTGGATACGTTTTTGCCTTCTCAATATTTGTTGGAGTGGTCTTTGGGGTGTTATGTGAAGCTCAATATTTTCAGAATGTCATGCGTGTTGGATTCCGGCTAAGATCAACACTGGTAGCTGCTGTATTTCGCAAATCATTAAGGCTTACCCATGAAGCTCGAAAGCAATTTGCATCTGGAAAAATAACCAACTTGATGACTACTGATGCCGAAGCACTTCAGCAAATATGCCAGTCACTTCATACTTTGTGGTCAGCTCCGTTCCGCATTACCATTGCCATGGTTCTTCTTTATCAACAACTAGGTGTTGCTTCCCTTTTGGGCGCTTTGATGCTAGTCCTTATGTTTCCATTACAGACATTTATCATCAGTAGAATGCAGAAGTTGTCTAAGGAAGGATTACAACGTACAGACAAGAGAATTGGCCTTATGAATGAAGTTTTGGCAGCTATGGACACTGTAAAATGTTATGCATGGGAGAGTAGTTTCCAGTCTAAAGTTCAGAATGTCCGAGATGATGAATTATCATGGTTTCGAAAAGCATCATTACTTGGAGCGTTAAATGGATTCATACTGAATAGTATTCCAGTTTTTGTAACTGTGATTTCATTTGGAATGTTCACCTTACTTGGAGGGAATTTGACACCCGCAAGAGCTTTTACATCACTTTCTCTGTTTGCTGTGCTTCGGTTTCCTCTCTTCATGCTTCCTAATATTATAACTCAGGCGGTTAATGCAAATGTATCATTGAAGCGTTTGGAGGATTTGCTCTTAGCAGAAGAGAGAATACTTTTACCAAATCCACCGCTTGAGCCAGGATTACCAGCCATCTCAATCAAAAACGGAAACTTCTCTTGGGATTCCAAGGCAGAAAGGCCTACATTGGCGAACATAAACTTGGATATACCTGTTGGTAGCCTAGTTGCAGTTGTTGGAAGTACAGGAGAAGGGAAAACATCACTAGTATCTGCAATGCTTGGAGAACTTCCTGCAGTTGTAGGTTCAACTGTTGTTATGAGAGGGACAGTTGCTTACGTACCCCAAGTCTCTTGGATTTTTAATGCAACTGTGCGAGATAATGTTTTATTTGGTTCTGCCTTTGACCCAATAAGATATGAAAGGGCAATAGATGTGACTGAACTACGACATGACCTTGAGTTACTGCCTGGTGGTGATCTTACCGAAATTGGTGAAAGAGGTGTGAACATCAGTGGTGGTCAAAAGCAAAGAGTATCCATGGCTAGAGCTGTCTACTCCAAATCCGACGTGTACATTTTTGATGATCCCCTTAGTGCTCTAGATGCGCATGTCGCTAAACAGGTTTTTGATAAATGCATCAAGGGAGAATTGAGAGGGAAGACCCGAGTTCTTGTTACAAATCAACTGCATTTCCTTTCACAGGTGGATAGAATCATTTTGATCCATGAAGGTACTGTGAAAGAGGAGGGAACATTTGAGGAGCTCTCTAACCAGGGGCCATTGTTCCAAAAGCTTATGGAAAATGCTGGAAAGATGGAGGAGTATGAAGAAGAAACGGTAGATACTGAAACTGCTGATCCAAAGTCCTCTTCAAAACAGGTGGCCAATGGAGAACTTAATGATACTGCAAAGAGTGGGAGTAAGGCAAAAGAAGGAAAATCTGTCCTTATTAAACAGGAAGAACGGGAAACAGGTGTTGTCAGTATGAAAGTTTTAGCAAGATACAAGACTGCATTAGGAGGTCTTTGGGTGGTTGTAATACTCTTTGGATGCTATTTCTTAACAGAAGTGTTACGAATTTCAAGTAGCACATGGTTGAGCCATTGGACTGATCAGAGTGCTTCAGTGGGCTATGATCCTGGATTTTATAATCTGATATATGCAGCTCTATCATTTGCTCAGGTTATGGTGACTTTAACAAATTCTTATTGGTTGATCATATCAAGTCTATATGCAGCCAGAAGGTTGCATGAAGCCATGCTTCACTCCATATTACGAGCTCCTATGGTTTTTTTTCATACAAATCCACTTGGAAGAGTAATCAACAGGTTTGCAAAGGATTTAGGTGACATTGATCGTAATGTTGCCCCATTTGTCAATATGTTTCTGGGTCAAGTGTCTCAGCTCCTTTCAACATTCGTCCTGATAGGGATTGTCAGCACAATGTCCTTGTGGGCGATAATGCCGTTGTTGGTACTGTTTTATGGAGCATATCTCTACTATCAGAGCACCGCCCGTGAAGTAAAGCGCTTAGATTCAATTAGTAGATCCCCTGTTTATGCACAATTTGGAGAAGCACTTAATGGTCTATCAACAATTCGCGCTTACAAGGCTTATGACCGCATGGCTGATATCAACGGAAAGTCCATGGACAACAACATACGATTCACTCTGGTGAACATGAGTGGAAATCGATGGCTTGCAATTCGATTGGAAACTCTGGGAGGTCTCATGATATGGTTTACTGCAACCTTTGCGGTAATGCAGAATGGGAGGGCCGAGAACCAGCAGGAATTTGCATCCACCATGGGTTTACTACTTAGTTATGCTTTGAACATTACCAGTTTGCTTACTGGTGTGCTCAGGCTTGCTAGTTTGGCTGAGAATAGTCTAAATGCCGTTGAGCGTGTTGGCACTTATATAGATTTGCCTTCAGAGGCACCATCCATCATTGAGGATAGTCGCCCCCCTCCAGGCTGGCCCTCATCTGGATCAATCAGATTTGAGGATGTTGTACTTCGATACAGGCCTGAACTTTCTCCTGTCCTTCATGGCTTGAATTTCATAATTTTTCCAAGCGATAAGGTTTGCATTGTAGGAAGGACAGGAGCTGGAAAATCTAGCATGCTTAATGCTTTATTTTGA | 3858 | 0.4196 | MAFEPLDWYCQPVANGVWTTTVDNAFGAYTPCAVDSLVISVSHLVLLGLCVYRIWLIKKDFKAKRFCLRSKLYNYLLGLLALYCVAEPLYRLIAGLSILNLDGQTQLAPFEITSLVIEVLTWGAMLILIGVETKVYIYEFRWFIRFGLLYSIVGDTVMLNLIISVQELYSRSVLYLYISEVVCQALFGLLLLVYIPTLDPYPGSTPVRSDLVVDTAYEELHGGEQICPERHANILSRILFSWMNPIMNLGYQRPLTEKDIWKLDTWDRTETLNEKFQRCWVEESRRSKPWLLRALNASLGGRFWWGGFWKIGNDLSQFLGPLILNQLLESMQNGDPAWIGYVFAFSIFVGVVFGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRLTHEARKQFASGKITNLMTTDAEALQQICQSLHTLWSAPFRITIAMVLLYQQLGVASLLGALMLVLMFPLQTFIISRMQKLSKEGLQRTDKRIGLMNEVLAAMDTVKCYAWESSFQSKVQNVRDDELSWFRKASLLGALNGFILNSIPVFVTVISFGMFTLLGGNLTPARAFTSLSLFAVLRFPLFMLPNIITQAVNANVSLKRLEDLLLAEERILLPNPPLEPGLPAISIKNGNFSWDSKAERPTLANINLDIPVGSLVAVVGSTGEGKTSLVSAMLGELPAVVGSTVVMRGTVAYVPQVSWIFNATVRDNVLFGSAFDPIRYERAIDVTELRHDLELLPGGDLTEIGERGVNISGGQKQRVSMARAVYSKSDVYIFDDPLSALDAHVAKQVFDKCIKGELRGKTRVLVTNQLHFLSQVDRIILIHEGTVKEEGTFEELSNQGPLFQKLMENAGKMEEYEEETVDTETADPKSSSKQVANGELNDTAKSGSKAKEGKSVLIKQEERETGVVSMKVLARYKTALGGLWVVVILFGCYFLTEVLRISSSTWLSHWTDQSASVGYDPGFYNLIYAALSFAQVMVTLTNSYWLIISSLYAARRLHEAMLHSILRAPMVFFHTNPLGRVINRFAKDLGDIDRNVAPFVNMFLGQVSQLLSTFVLIGIVSTMSLWAIMPLLVLFYGAYLYYQSTAREVKRLDSISRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDNNIRFTLVNMSGNRWLAIRLETLGGLMIWFTATFAVMQNGRAENQQEFASTMGLLLSYALNITSLLTGVLRLASLAENSLNAVERVGTYIDLPSEAPSIIEDSRPPPGWPSSGSIRFEDVVLRYRPELSPVLHGLNFIIFPSDKVCIVGRTGAGKSSMLNALF* | 1286 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy10g0042 | 1285 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY C | 32 | 1285 | - | - | |
Ahy10g0042 | 1285 | SUPERFAMILY | ABC transporter transmembrane region | 913 | 1217 | IPR036640 | GO:0005524|GO:0016021 | |
Ahy10g0042 | 1285 | Gene3D | - | 1220 | 1285 | IPR027417 | - | |
Ahy10g0042 | 1285 | CDD | ABCC_MRP_domain1 | 615 | 816 | - | - | |
Ahy10g0042 | 1285 | CDD | ABC_6TM_ABCC_D2 | 916 | 1212 | IPR044726 | GO:0140359 | |
Ahy10g0042 | 1285 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 304 | 583 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Ahy10g0042 | 1285 | SMART | AAA_5 | 642 | 816 | IPR003593 | - | |
Ahy10g0042 | 1285 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1228 | 1284 | IPR027417 | - | |
Ahy10g0042 | 1285 | MobiDBLite | consensus disorder prediction | 857 | 874 | - | - | |
Ahy10g0042 | 1285 | MobiDBLite | consensus disorder prediction | 844 | 878 | - | - | |
Ahy10g0042 | 1285 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 917 | 1200 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Ahy10g0042 | 1285 | CDD | ABC_6TM_ABCC_D1 | 305 | 591 | IPR044746 | GO:0140359 | |
Ahy10g0042 | 1285 | Gene3D | ABC transporter type 1, transmembrane domain | 277 | 601 | IPR036640 | GO:0005524|GO:0016021 | |
Ahy10g0042 | 1285 | Gene3D | ABC transporter type 1, transmembrane domain | 879 | 1218 | IPR036640 | GO:0005524|GO:0016021 | |
Ahy10g0042 | 1285 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 617 | 839 | IPR003439 | GO:0005524 | |
Ahy10g0042 | 1285 | Pfam | ABC transporter transmembrane region | 917 | 1160 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Ahy10g0042 | 1285 | Pfam | ABC transporter transmembrane region | 307 | 571 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Ahy10g0042 | 1285 | Gene3D | - | 610 | 865 | IPR027417 | - | |
Ahy10g0042 | 1285 | SUPERFAMILY | ABC transporter transmembrane region | 289 | 591 | IPR036640 | GO:0005524|GO:0016021 | |
Ahy10g0042 | 1285 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 612 | 838 | IPR027417 | - | |
Ahy10g0042 | 1285 | PANTHER | ABC TRANSPORTER C FAMILY MEMBER 1 | 32 | 1285 | - | - | |
Ahy10g0042 | 1285 | Pfam | ABC transporter | 633 | 768 | IPR003439 | GO:0005524 | |
Ahy10g0042 | 1285 | ProSitePatterns | ABC transporters family signature. | 741 | 755 | IPR017871 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy10g0042 | Ahy-Chr10 | 500550 | 529452 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy10g0042 | 595 | 831 | Calmodulin-binding Proteins | AT2G36910 | 27.059 | 1.13e-22 | 103 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy10g0042 | - | - | gmx:100801762 | 2218.74 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Ahy20g0210 | 20 | 1854604 | 1871915 | Ahy10g0042 | 10 | 500550 | 529452 | hybridization |