Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0033 ATGGGAAGAGGCAGAGGAGTTGCGGCTCTGAAACCCACTGCGGCGTTTGCGGCGGCGGAGGTAAACGGATCAGGGCCGATGCCAGTATTGAAGGAAGTTAGATACCGCGGCGCGAAGAAGAGACCGTGGGGAAGATTCACCGCCGAAATCAGAGACCCATTGAAGAAAGTAAGGGTTTGGCTCGGAACCTTCGATTCTGCCGAGGACGCCGCACACGCTTACGACGCCACCGCAAGAACACTTCGGGGACTAAAAGCCAATACCAATTTTCCTCGCCGCTCAGGATCCAGCCCTCAATGTAGAATTGCAGCTTCGCCAGCGCCACTTGCTGCGATAGGAGATTTAACCCTCTGCCGCCCTGGATGGCAACTTTCTCTTCGGCCAAAGCCGTTTCCTCCATATGTAATTTTTTGTAAGTTGCTGATTCTTCATAAATTGCACAATCTGGACTGGTTGAATTGTAAACGGAGCCTGTGA 477 0.5262 MGRGRGVAALKPTAAFAAAEVNGSGPMPVLKEVRYRGAKKRPWGRFTAEIRDPLKKVRVWLGTFDSAEDAAHAYDATARTLRGLKANTNFPRRSGSSPQCRIAASPAPLAAIGDLTLCRPGWQLSLRPKPFPPYVIFCKLLILHKLHNLDWLNCKRSL* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0033 158 CDD AP2 34 91 IPR001471 GO:0003700|GO:0006355
Ahy10g0033 158 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 5 102 - -
Ahy10g0033 158 SMART rav1_2 34 97 IPR001471 GO:0003700|GO:0006355
Ahy10g0033 158 PRINTS Ethylene responsive element binding protein signature 57 73 IPR001471 GO:0003700|GO:0006355
Ahy10g0033 158 PRINTS Ethylene responsive element binding protein signature 35 46 IPR001471 GO:0003700|GO:0006355
Ahy10g0033 158 ProSiteProfiles AP2/ERF domain profile. 34 91 IPR001471 GO:0003700|GO:0006355
Ahy10g0033 158 Gene3D AP2/ERF domain 33 93 IPR036955 GO:0003700|GO:0006355
Ahy10g0033 158 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 3-RELATED 5 102 - -
Ahy10g0033 158 Pfam AP2 domain 34 83 IPR001471 GO:0003700|GO:0006355
Ahy10g0033 158 SUPERFAMILY DNA-binding domain 34 92 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0033 Ahy-Chr10 387622 388098 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0033 1 91 AP2-EREBP Transcription Factor Family AT1G50640 63.736 5.01e-31 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Ahy10g0033 AP2 3.30E-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0033 K09286 - zju:107432807 114.775