Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g2390 ATGAACGAGAAAGCCAACGTTTCCAAGGAACTTAACGCCAAGCACAAGAAGATACTGGAAGGGCTTCTTAAATTACCAGAGAATAGGGAATGTGCTGACTGCAAAGCTAAGGGTCCAAGGTGGGCTAGTGTCAATCTTGGCATCTTTATATGCATGCAGTGCTCAGGAATTCATCGAAGTTTGGGTGTACATATATCGAAGGTTCGTTCTGCAACACTGGACACTTGGCTTCCAGAGCAAGTTGCATTCATTCAATCCATGGGAAATGAGAAAGCAAATAGTTACTGGGAAGCAGAATTACCTCCTAACTATGATAGAGTTGGAATTGAGAATTTCATTCGTGCAAAGTATGAAGAGAAAAGATGGGTTCCAAGGGATGGGTTACCAAAATCACCCTCTAGACTGCAGGAAGAAAAATCTCCTTTGCATTGGCAGAGGCCTGGGGAAAGAAGTGGGCATAGTTATGCAACTGCTTCTGAGAATACTTTTGAGGAAAGGAAGAAAATCCAATCATCGAATGCAATTCCTGCTGCAAGAATTAGTGCTCCTGCTCCTTCGAAGGCACCTGAACATGTAAGTCATGTTGCCAAACCTCAGAATGCTGAGAAAGTGGAAGCAGTAGCACCGCAACCACAAGTTGAAGCTCCAAAGAAGGTTACAGACACTGCTCAAAATACCCCTCCAAAAGTTGACTATGCCACAGATCTTTTCAACATGTTATCTATGGATGGCCCTAGTGTAAATGGCTCAGAAGCAACTGGTGCAACCAGTGATGATAATAACTGGGCAGGCTTCCAGTCTGCTTCAGAGGCGTCGACAGCTGAGAAGACTCCTCCAAAATCAGTTGAAAGCACTCCCCAGTCTGCATCTGGAATAGAAGATCTATTTAAAGATTCTCCTTTAGTTACACCAAGCTTAGCTGCAGAAAAACCACAGAAAGATGTAAAAAATGATATAATGAGCCTCTTTGAGAAGAGCAATATGGTTTCTCCTTTTGCTATGCATCAACAGCAACTTGCCATGCTAGCACAGCAACAGTCTCTTTTAATGGCTGCTGCAGCTAAATCTACTGCTGGGGATCCCGGATTCCCTGCTAGTATGCAACAACCTCGGCCCAATATTCCGGTCCAGGGTTGGCCAGCTGCTAGCTACCCAATGTCTGGAGTGATGTCCATGGATGGTCAGGGAGATCTGCAGAAACTTATGCAGACTAGGGGCGTAGCTCCAGCAAATCTAGCAGGGAACTCTGTTCAGTATCCACCATCTGGTTTCTATGGTATGGGGCAAGTTGCTCCAGTAAATGGAATGATGACAATGGGAGTGAGTAAAACTCAGCCAGCAGCTCCAGATTCATCAACATCCACTCCACAATCTGCTAAGGATTATGATTTTTCCTCGTTAACACAAGGGATGTTTGCAAAACCCTGA 1428 0.4468 MNEKANVSKELNAKHKKILEGLLKLPENRECADCKAKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDTWLPEQVAFIQSMGNEKANSYWEAELPPNYDRVGIENFIRAKYEEKRWVPRDGLPKSPSRLQEEKSPLHWQRPGERSGHSYATASENTFEERKKIQSSNAIPAARISAPAPSKAPEHVSHVAKPQNAEKVEAVAPQPQVEAPKKVTDTAQNTPPKVDYATDLFNMLSMDGPSVNGSEATGATSDDNNWAGFQSASEASTAEKTPPKSVESTPQSASGIEDLFKDSPLVTPSLAAEKPQKDVKNDIMSLFEKSNMVSPFAMHQQQLAMLAQQQSLLMAAAAKSTAGDPGFPASMQQPRPNIPVQGWPAASYPMSGVMSMDGQGDLQKLMQTRGVAPANLAGNSVQYPPSGFYGMGQVAPVNGMMTMGVSKTQPAAPDSSTSTPQSAKDYDFSSLTQGMFAKP* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g2390 475 PANTHER ARF GTPASE ACTIVATOR 1 474 - -
Aev10g2390 475 CDD ArfGap 19 117 - -
Aev10g2390 475 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 474 IPR044520 GO:0005096
Aev10g2390 475 ProSiteProfiles ARF GTPase-activating proteins domain profile. 16 130 IPR001164 GO:0005096
Aev10g2390 475 Gene3D Arf GTPase activating protein 1 127 IPR038508 -
Aev10g2390 475 MobiDBLite consensus disorder prediction 441 465 - -
Aev10g2390 475 MobiDBLite consensus disorder prediction 124 146 - -
Aev10g2390 475 MobiDBLite consensus disorder prediction 243 291 - -
Aev10g2390 475 MobiDBLite consensus disorder prediction 441 475 - -
Aev10g2390 475 Pfam Putative GTPase activating protein for Arf 17 123 IPR001164 GO:0005096
Aev10g2390 475 SMART arf_gap_3 16 130 IPR001164 GO:0005096
Aev10g2390 475 PRINTS HIV Rev interacting protein signature 68 89 IPR001164 GO:0005096
Aev10g2390 475 PRINTS HIV Rev interacting protein signature 47 64 IPR001164 GO:0005096
Aev10g2390 475 PRINTS HIV Rev interacting protein signature 28 47 IPR001164 GO:0005096
Aev10g2390 475 SUPERFAMILY ArfGap/RecO-like zinc finger 15 124 IPR037278 -
Aev10g2390 475 MobiDBLite consensus disorder prediction 124 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g2390 Aev-Chr10 23527796 23539600 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g2390 16 123 C2H2 Transcription Factor Family AT4G05330 49.138 5.14e-30 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g2390 K12486 - gmx:100789910 710.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g2390 10 23527796 23539600 Aev10g2390 10 23527796 23539600 ECH