Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g2381 ATGGAGAGCAAGAGTTTTGAAGATTCTGATGACAGAAGCAGTGAAAACACCAGCATGTGTAGGTCGGAAAACAGCAACCAGGAATCTGACACGTCTTTTTCTGATTGGTCTGATGAAGAAGAAGTAGAAAACAACAGTTTGGATAATAGGCAGAAAACATATGTGAGGCAAGGTGAAAAGTTGAAAGAGAAAATGACAACCAATGATTATTGCCTGACTGATGTAGTCCAAGTAACTGCTGCTGACTTTGATGGTCGAGAGTTTCAAACTGAAGATGAAGCGTATGACTTATATGTGAAATATGCTAGAGTAGTTGGATTTGGGGTAAGGAAAAGTGATCTTGCTCGTGACAGAAATGGTCGACCATGTAGGCGCAAGTTTGTGTGTAGTCGTGCGGGTGTTAGAGATGAAAAACATTACAATAGAGATGATAGGAAGCGTGAGCACAAGGCAGAGACAAGAAGTAATTGCAGTGCTAGGTTGATGATATACAGGAGTAAGAGGATGGGTGTTTGGCGAGTGCGGAGATTGATTGTCGAGCACAATCATGAGTTGACAATGCAGTATTTCGCGCATCTCATACCAAACCATCGTCGAATCCACAATGGGGAGAAGGCACAAATAGAGACAATGCATAGATATGGGATGCAGACGTCACAGATAATGGGCTTCATGGCTGGCCAATCGGGGGGTTATCGAAGATTAGGATTTTCCAAGAAGGACTTATATAACTACATTGATCGTGATAGAAGAGGTAAAATAGCTGATGGCGATGCCGAAGCTGCAATTAGCTACTTGGAGGGCAGGGCTGATAGTGATGGACTTACTCTTGCTAGGAAGGAGATTGAGCATGTTTCTTCATTGGTTCTTGTTAATCGGACGAGAATGTCTACTAGTGTTGCGTACAAGTTGTGCAAATTTGGCAAACCTGGTCGCATATTTGAAGTCCTTTACGATAGGAACGGGGACAAGGATGGGGCAAAGGAGGAACACATTTGTGAGATGCCGAAAAGCATGATAAAGAGGCGTTGGTGCAAGGATGCAAAGGTGTTTGAGGATAATGGGGACGATGATGATACTGGGAAGATCGCAAATATTGCGGCGCGCAGCACTGACTTCAGCAAGCGGGGTACTGCAACATCCTCGGAGACAATGAAAATTGGTGACCCAAATGTGTCGAAGACAAAGGGTGCCCCAAGGAAAGGGAAGGCGGGTTTAAAGAAACGTTGTTGCTCCAATTGCGGTCAAGGTGGTCACACAAAGAGAACTTGTCGAAATAGTAAAGAGCCGGACGAGCCTAATACTGATGATGAATATGATGCCATGGATAGTCGAATGGAAAAATGCGAGGCTGGCATGAATGTTTGTAACAAGCACGCAGCAGTCAACAGCTGGGATGCAGAAAGATGGGATGGTGTTTTCCAAAGTGAGATAAGTCCGTTTAATGGAAACCCATCCGCGGGTGGAATAGAAGTGTTTCTGGTGACCCTGGACACCAATGGTTGCTACAGTCAACAGGGTGCAGATAGATCAACGTCCTGA 1542 0.4475 MESKSFEDSDDRSSENTSMCRSENSNQESDTSFSDWSDEEEVENNSLDNRQKTYVRQGEKLKEKMTTNDYCLTDVVQVTAADFDGREFQTEDEAYDLYVKYARVVGFGVRKSDLARDRNGRPCRRKFVCSRAGVRDEKHYNRDDRKREHKAETRSNCSARLMIYRSKRMGVWRVRRLIVEHNHELTMQYFAHLIPNHRRIHNGEKAQIETMHRYGMQTSQIMGFMAGQSGGYRRLGFSKKDLYNYIDRDRRGKIADGDAEAAISYLEGRADSDGLTLARKEIEHVSSLVLVNRTRMSTSVAYKLCKFGKPGRIFEVLYDRNGDKDGAKEEHICEMPKSMIKRRWCKDAKVFEDNGDDDDTGKIANIAARSTDFSKRGTATSSETMKIGDPNVSKTKGAPRKGKAGLKKRCCSNCGQGGHTKRTCRNSKEPDEPNTDDEYDAMDSRMEKCEAGMNVCNKHAAVNSWDAERWDGVFQSEISPFNGNPSAGGIEVFLVTLDTNGCYSQQGADRSTS* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g2381 513 MobiDBLite consensus disorder prediction 374 389 - -
Aev10g2381 513 MobiDBLite consensus disorder prediction 1 51 - -
Aev10g2381 513 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 12 296 - -
Aev10g2381 513 Pfam FAR1 DNA-binding domain 97 186 IPR004330 -
Aev10g2381 513 MobiDBLite consensus disorder prediction 374 401 - -
Aev10g2381 513 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 12 296 - -
Aev10g2381 513 MobiDBLite consensus disorder prediction 416 438 - -
Aev10g2381 513 SUPERFAMILY Retrovirus zinc finger-like domains 396 429 IPR036875 GO:0003676|GO:0008270
Aev10g2381 513 MobiDBLite consensus disorder prediction 1 17 - -
Aev10g2381 513 ProSiteProfiles Zinc finger CCHC-type profile. 411 426 IPR001878 GO:0003676|GO:0008270
Aev10g2381 513 MobiDBLite consensus disorder prediction 18 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g2381 Aev-Chr10 23460303 23463172 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aev10g2381 FAR1 5.6e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g2381 - - aip:107606633 240.736