Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g2370 ATGGCAAAGTCTTGTTCTTCTTCTTCTTCTAATGAAAAGAATGGATTGAAGAAAGGTCCATGGACTCCAGAGGAAGATCAGAAGCTTATGGATTACATTCAGAAACATGGACATGGCAAGTGGCGAACTCTTCCCAAGAATGCAGGACTTAAAAGATGTGGAAAGAGTTGCCGTCTTCGATGGGCTAATTACTTGAGGCCAGACATAAAGAGAGGAAGATTCTCATGCGAAGAAGAAGAAACCATCATCCAGTTACACAGTGTTTTGGGAAACAAGTGGTCTACAATTGCTGCTAACTTACCAGGAAGAACAGACAATGAGATAAAGAATTATTGGAACACTCACATAAAGAAGAAGCTATTGAAGATGGGGATTGATCCTGTTACTCACACACCACGCCTTGATGTTCTTCAACTCTCTTCACTTCTAGCCTCCTCTGTGTTCAATAATAATCATAATAACTATCCTGGGCTTATGCCAACTCTGGCCTCAAACTCAAATCCAAACCAACTCCTAAATCTGCTCACAACTCTGTTTTCATGCCAAACTAGAATAACCCACGATGTTGTTTTGAATCCAAATTACCAGATTGGCATCAGTGAGGCTTTATTGCAAAATCATCAATCTCAGTGCTCCCAACAAATGCAGCTTAACTCTAGCCAGTTACAAAATCAGGCTCAAGCTTCAATCCAAGAACCCCCACAACCTTGTGCTACATCCAGCACCAGCAGTAACCCCCATTTGCATGTGCAACCCCTAAACATGATGAAATCAAAATTAGAGCATCAAATAATCTCTCAGACCTCTTTTAGCCACCAAAACTCACTGCCAAATTTGTGGCACTATAATGGCCAAGCATCATCAGCTATGCAAACTTCCCCTTCACCAAAGTTGAATCATTCTGTCCTTAATAATATCTTGGAGAATCAAACTTTGTGTAACAATGAAGGGATTTTGCCGAATTTCAGTTTGAGCTCGTTACTGTCCTCCACATCTTCATCTTCATCTTCGTCATTCGTCAATGGAACCACTGCCGAAGATGAAAGGGACACTTACGGCAGCAACATGATGATGTATAGCATATCAAATGGCTTCAATAACTCTACACTTCTGTGA 1116 0.4095 MAKSCSSSSSNEKNGLKKGPWTPEEDQKLMDYIQKHGHGKWRTLPKNAGLKRCGKSCRLRWANYLRPDIKRGRFSCEEEETIIQLHSVLGNKWSTIAANLPGRTDNEIKNYWNTHIKKKLLKMGIDPVTHTPRLDVLQLSSLLASSVFNNNHNNYPGLMPTLASNSNPNQLLNLLTTLFSCQTRITHDVVLNPNYQIGISEALLQNHQSQCSQQMQLNSSQLQNQAQASIQEPPQPCATSSTSSNPHLHVQPLNMMKSKLEHQIISQTSFSHQNSLPNLWHYNGQASSAMQTSPSPKLNHSVLNNILENQTLCNNEGILPNFSLSSLLSSTSSSSSSSFVNGTTAEDERDTYGSNMMMYSISNGFNNSTLL* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g2370 371 CDD SANT 73 116 IPR001005 -
Aev10g2370 371 ProSiteProfiles Myb-like domain profile. 66 116 IPR001005 -
Aev10g2370 371 CDD SANT 20 65 IPR001005 -
Aev10g2370 371 Gene3D - 73 120 - -
Aev10g2370 371 MobiDBLite consensus disorder prediction 1 16 - -
Aev10g2370 371 SMART sant 17 67 IPR001005 -
Aev10g2370 371 SMART sant 70 118 IPR001005 -
Aev10g2370 371 PANTHER TRANSCRIPTION FACTOR MYB30-LIKE 7 359 - -
Aev10g2370 371 Gene3D - 17 70 - -
Aev10g2370 371 SUPERFAMILY Homeodomain-like 15 112 IPR009057 -
Aev10g2370 371 MobiDBLite consensus disorder prediction 1 24 - -
Aev10g2370 371 MobiDBLite consensus disorder prediction 215 246 - -
Aev10g2370 371 ProSiteProfiles Myb-like domain profile. 13 65 IPR001005 -
Aev10g2370 371 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 120 IPR017930 -
Aev10g2370 371 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 13 65 IPR017930 -
Aev10g2370 371 Pfam Myb-like DNA-binding domain 71 115 IPR001005 -
Aev10g2370 371 Pfam Myb-like DNA-binding domain 18 65 IPR001005 -
Aev10g2370 371 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 7 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g2370 Aev-Chr10 23396710 23398621 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g2370 12 180 MYB Transcription Factor Family AT4G21440 72.626 1.12e-89 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev10g2370 Myb_DNA-binding 6.4e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g2370 K09422 - gmx:100820398 407.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g2370 10 23396710 23398621 Aev10g2370 10 23396710 23398621 ECH