Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g2369 ATGATGGACGTGGACCCTATGGATTTGCTCCGATCAACCCTTTCCCGCGTTCGCATCCCCGAACCCACCAATCGCATCTACAAACAAGAATGCTGCTTGTCCTTTGACACTCCCAAGTCAGAAGGTGGGTTGTTCATCGACATGTTCACTTTCCTTGCATTTGGGAAAGACTGTGTGGGTTGGAACTTCGAGAAGACTGGTAACCCTGTTTATTTGCATATAAAGAAGACCAAGAAATTTGTTCCAGAAGACAGGCCTTCTAAGAAACCAACCCGTCTGGCCATAGGTGTTGATGGGGGATTTGATAACAATGAACCTGAATATGAAGAAACTCATAGTATAGTCATATTGCCTGACTATGTATCCCTTCCATTTCCTTCAGTGGAATTGCCAGAGAAGGTAAGGTTGGCTGCGGATGCTATCTTACTAGCTGAGGGTGCTGAACGGAAGGAGCAAGTTGCAGCTTGGACTGCTGCTGACAAGAAATCAGTTAGCGCTTATGCAATGGAGTTACAGCAGATTGAGAGTGGTGTTGTTATTCCTCCATCTGGGTGGAAGTGTGCTGAGTGTGATAAGACAGACAATCTTTGGCTAAATCTGACTGATGGAAAGATTCTTTGTGGGAGGAGAAATTGGGATGGAACTGGTGGAAACAACCATGCTGTTGAACATTATAAAAAGACTTCTTACCCTCTTGCTGTAAAGCTTGGGACTATCACTGCTGATTTGGAAGCAGCAGATGTTTACTCCTATCCCGAGGATGACAGTGTCTTGGACCCACTTTTAGCACAGCATCTGGCCTTTTTTGGCATTGACTTCTCATCATTGCAAAAGACTGAAATGACAACTGCTGAAAGAGAACTTGACCAAAATGTCAATTTTGATTGGGATCGAATCCAAGAAAGTGGAGAGCATCTCGAACCAGTTTTTGGACCTGGATATACCGGTTTAGTCAATCTTGGAAATAGTTGTTACCTGGCAGCAACTATGCAAGTTGTGGTTTCAACACGAACATTCTCTTCAAGGTACTATATAGATCAAAATCTGAAGAAGGCATTTGAGGCAGCACCTGCCGATCCAACTGTGGACTTGAATATGCAGTTGACAAAACTGGCACATGGTCTACTTTCGGGCAAATATTCCAAGCCAGCTGACGAGAATGATGACAGTGCAAATGTTGCTTCCTCAACTATGACTCCTAATCAGGAAGGGATACCCCCACGTATGTTCAAAGCTGTGATTGCTGCCAACCATCCTGAATTTTCATCCATGCGACAACAGGATGCTCTAGAATTTTTCCTTCATTTTCTCGATCAAGTTGAAAGAGCTAATGGCGGTCGAACAGGACTGGATCCTGCAAGGAGTTTCAAGTTTGGTATAGAAGATCGTATCATGTGTTCATCTGGAAAAGTTGCATACAATAGAAGGCATGACTACATCCTTTCTCTTAATATCCCAACACATGAAGCAACCAACAAAGAAGAAGTAGATTTGTTTTGCAAACTGAAAGCAGAGAAACTTTCTGAAGGAAAAGAAGTGTCTAAAGATGAGATTGTACGTCCAAGGGTTCCTTTAGAAGCTTGCCTTAGAAGCTTCTCAGCTCCTGAGGAGATACATGACTTTTACAGCACAGCCTTGAAAACAAAGACAACAGCAGTCAAGATGGCTGGCCTGACATCATTCCCTGATTACCTTGTGTTACATATGCGGAAATTTATTATGGATAAGGGATGGGTACCTAAAAAGCTTGATGTGTATATTGATGTTCCTGATATCATAGATATTAACCATATGCGCAGCAAAGGTCATCAGCCAGGGGAAGAGCTGTTACCAGATGGGGAACCCATTGAGGAGGATTCAGATATTCCTTCGGCCAACGAAGACATTGTTGCCCAGCTGGTTTCCATGGGCTTTAACCAGCTCCATTGTCAGAAAGCAGCTATAAACACCTCAAATGCTGGAGTAGAAGAGGCAATGAATTGGTTACTATCTCACATGGATGACCCAGATATTGACAATCCTATTTCAAAAGGTCATGGTTCCGATCACGTTGATCAATCAAGCGTTGATACTCTCATTTCATTCGGATTTCCCGAAGATGTTGCTCGGAAGGCACTGAAGGCATCGGGTGGTGACATTGAGAAAGCAACCGAGTGGATATTTAGCAATCCTGATGCATCAGTTTCCAGTATGGATGCTACTGTATCAAGCACTTCGTCTGCTCCAAATGACGCCGACTTACCGGACGGAGGAGGAAAATATCGACTTCTCGGATTCGTCAGCCACATGGGAACCTCGACGCAGTGTGGTCACTACGTTGCCCACATTTTGAAAGAAGGTAAATGGATTATTTATAACGACAAGAAGGTAGGGATTTCGGTTAATCCTCCTAAGGATATGGGCTATTTATATTTTTTCGAGAGGATTAGTGGCTGA 2436 0.4351 MMDVDPMDLLRSTLSRVRIPEPTNRIYKQECCLSFDTPKSEGGLFIDMFTFLAFGKDCVGWNFEKTGNPVYLHIKKTKKFVPEDRPSKKPTRLAIGVDGGFDNNEPEYEETHSIVILPDYVSLPFPSVELPEKVRLAADAILLAEGAERKEQVAAWTAADKKSVSAYAMELQQIESGVVIPPSGWKCAECDKTDNLWLNLTDGKILCGRRNWDGTGGNNHAVEHYKKTSYPLAVKLGTITADLEAADVYSYPEDDSVLDPLLAQHLAFFGIDFSSLQKTEMTTAERELDQNVNFDWDRIQESGEHLEPVFGPGYTGLVNLGNSCYLAATMQVVVSTRTFSSRYYIDQNLKKAFEAAPADPTVDLNMQLTKLAHGLLSGKYSKPADENDDSANVASSTMTPNQEGIPPRMFKAVIAANHPEFSSMRQQDALEFFLHFLDQVERANGGRTGLDPARSFKFGIEDRIMCSSGKVAYNRRHDYILSLNIPTHEATNKEEVDLFCKLKAEKLSEGKEVSKDEIVRPRVPLEACLRSFSAPEEIHDFYSTALKTKTTAVKMAGLTSFPDYLVLHMRKFIMDKGWVPKKLDVYIDVPDIIDINHMRSKGHQPGEELLPDGEPIEEDSDIPSANEDIVAQLVSMGFNQLHCQKAAINTSNAGVEEAMNWLLSHMDDPDIDNPISKGHGSDHVDQSSVDTLISFGFPEDVARKALKASGGDIEKATEWIFSNPDASVSSMDATVSSTSSAPNDADLPDGGGKYRLLGFVSHMGTSTQCGHYVAHILKEGKWIIYNDKKVGISVNPPKDMGYLYFFERISG* 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g2369 811 SUPERFAMILY Cysteine proteinases 310 809 IPR038765 -
Aev10g2369 811 MobiDBLite consensus disorder prediction 388 403 - -
Aev10g2369 811 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 315 809 IPR028889 -
Aev10g2369 811 Pfam Zn-finger in ubiquitin-hydrolases and other protein 187 260 IPR001607 GO:0008270
Aev10g2369 811 SMART Zf_UBP_1 186 241 IPR001607 GO:0008270
Aev10g2369 811 Pfam UBA/TS-N domain 626 662 IPR015940 -
Aev10g2369 811 Pfam UBA/TS-N domain 685 720 IPR015940 -
Aev10g2369 811 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 624 665 IPR015940 -
Aev10g2369 811 SMART uba_6 685 722 IPR015940 -
Aev10g2369 811 SMART uba_6 626 664 IPR015940 -
Aev10g2369 811 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 3 112 IPR013083 -
Aev10g2369 811 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 754 772 IPR018200 GO:0004843|GO:0006511
Aev10g2369 811 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 16 810 - -
Aev10g2369 811 SUPERFAMILY UBA-like 679 725 IPR009060 GO:0005515
Aev10g2369 811 Gene3D - 608 679 - -
Aev10g2369 811 Pfam Ubiquitin carboxyl-terminal hydrolase 315 806 IPR001394 GO:0004843|GO:0016579
Aev10g2369 811 CDD Peptidase_C19B 316 807 - -
Aev10g2369 811 CDD UBA2_atUBP14 687 724 - -
Aev10g2369 811 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 158 260 IPR013083 -
Aev10g2369 811 SUPERFAMILY RING/U-box 166 273 - -
Aev10g2369 811 PIRSF UBP 7 810 IPR016652 GO:0004843|GO:0016579
Aev10g2369 811 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 683 723 IPR015940 -
Aev10g2369 811 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 16 810 - -
Aev10g2369 811 Pfam Variant UBP zinc finger 17 79 IPR041432 -
Aev10g2369 811 Gene3D - 680 741 - -
Aev10g2369 811 Gene3D Cysteine proteinases 308 810 - -
Aev10g2369 811 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 316 331 IPR018200 GO:0004843|GO:0006511
Aev10g2369 811 ProSiteProfiles Zinc finger UBP-type profile. 163 273 IPR001607 GO:0008270
Aev10g2369 811 MobiDBLite consensus disorder prediction 381 403 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g2369 618 672 C2H2 Transcription Factor Family AT1G04850 34.545 5.28e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g2369 K11836 - gmx:100805602 1361.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g2369 10 23384713 23391413 Aev10g2369 10 23384713 23391413 ECH