Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g2342 ATGGCAGAGGATCAATTTCAATCAAGTGGAGGGAACTGGTGGGATTCTGCGGGTAGGAACAACAACAGCAACATGAGGTATGAGAGTGGAGGAGCATCACAGTCCTCTTCCTCAGGAATCAGCACCAACTCCAACTTTGCTAATTGGCACCAACAAGATCATCCTCATCCTCATCATCATGATCATGTGGCTGCTGCTGTTCGGAGGAGTTCCATGGAGGATGATGCAGGGCAGCACGGTGGCTCCTCTGTTGTGTTCCATCATCATCAACAACATCCTGACCCAAACTTGCACATGATGGGTTTAGGCCTCTCTTCGCCTTCTTCCTTGGATTGGGATCAACCTCCTTCCTTCCTGCGTGGCGAGAAGGGCGGTGCAGAGAACAGCAGCAGTTTGAGGTGTATGGTGCAGCAGGAGAACTTGGGATCATCAAGAACAAATAACTACCAGCAGCAGTTCAGCCCAGGGGACAGCACGGTGACGAGCCAGCAAGGCAGCGGTTTCCACCACAACATTGAGTCCTCAGCTCTGTATGGCTCCCCTTCATCCATCTTAATGCAAGGGCTGCTGTTGGGCCCGCCTCCTCCTGATCCCACCAATACCAACCTCCAACACCTCCCATTCCCTTCAATGACCTATGGCTTGATGACCTCCAATGCTAGTGCTACTGATTTGGTGCCTCCTGCAGCCCCTGCTCAGCAGCAGTTATTCTTCAGAGGGTCTGCACCGCCCAACAACCACAACCACTTGCTGCATTTCACCAACAATGCTCCCTTTTGGAATGCCTCTGAGGCCGCTTCTCCTACTATCAAACATCTTCGCTCCACCGCCTTCTTCCCTTCATCATTGCAACCCCCATTCTCCACCTCTCCTCCAAACCTTGATAGTATGTGTGAAGTGAGGGAGTCGGGTGGTGCGGTGAAGAAAAGTGGGAGCGAGCAAACGGCAAAAAGGCCTCGCAACGAAACCCCATCTCCTTTGCCAGCTTTTAAGGTGAGAAAAGAGAAGATGGGGGACAGAATCACTGCACTCCAACAATTGGTGTCACCTTTTGGAAAGACTGATACAGCCTCAGTGTTATCTGAAGCCATTGAATACATCAAATTCCTCCATGAACAGGTCACTGTTTTGAGTACCCCTTATATGAAAAGTGGAGCTCCTATACAGATTCAACAGAGTTCTGGGAAGTTTAAGGAGGGTGGTGAAGGTCCAAAACAAGATCTTAGAAGCAGAGGGCTATGCTTGGTGCCAGTTTCAAGCACATTTCCAGTGACTCATGAAACAACGGTTGATTTTTGGACTCCAACATTTGGAGGGGGCTCCAGATAG 1329 0.5019 MAEDQFQSSGGNWWDSAGRNNNSNMRYESGGASQSSSSGISTNSNFANWHQQDHPHPHHHDHVAAAVRRSSMEDDAGQHGGSSVVFHHHQQHPDPNLHMMGLGLSSPSSLDWDQPPSFLRGEKGGAENSSSLRCMVQQENLGSSRTNNYQQQFSPGDSTVTSQQGSGFHHNIESSALYGSPSSILMQGLLLGPPPPDPTNTNLQHLPFPSMTYGLMTSNASATDLVPPAAPAQQQLFFRGSAPPNNHNHLLHFTNNAPFWNASEAASPTIKHLRSTAFFPSSLQPPFSTSPPNLDSMCEVRESGGAVKKSGSEQTAKRPRNETPSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTVLSTPYMKSGAPIQIQQSSGKFKEGGEGPKQDLRSRGLCLVPVSSTFPVTHETTVDFWTPTFGGGSR* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g2342 442 MobiDBLite consensus disorder prediction 1 51 - -
Aev10g2342 442 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 321 370 IPR011598 GO:0046983
Aev10g2342 442 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 86 432 - -
Aev10g2342 442 Gene3D - 331 388 IPR036638 GO:0046983
Aev10g2342 442 PANTHER TRANSCRIPTION FACTOR BHLH123 86 432 - -
Aev10g2342 442 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 331 386 IPR036638 GO:0046983
Aev10g2342 442 SMART finulus 332 376 IPR011598 GO:0046983
Aev10g2342 442 MobiDBLite consensus disorder prediction 1 96 - -
Aev10g2342 442 MobiDBLite consensus disorder prediction 52 75 - -
Aev10g2342 442 MobiDBLite consensus disorder prediction 302 328 - -
Aev10g2342 442 CDD bHLH_AtbHLH_like 327 378 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g2342 Aev-Chr10 23246355 23248917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g2342 251 442 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 61.275 1.15e-64 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g2342 - - ahf:112772433 413.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g2342 10 23246355 23248917 Aev10g2342 10 23246355 23248917 ECH