Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aev10g2336 | ATGGCGATGAGGGCGGCGGCGCAGCGAGGCTTACGCCGGCTATTCTGCACCAATCCTTATTCTCCGCCGTCGGCAACTGCGGCGACTTCTGCTCCGAAAACGCTGGAACCCAACCCTACCCTCTTTGTTTCCGGACTTAACAAACGTACGACCCCAGAGAGGCTGCTCGAAGAATTTTCCAAGTTTGGTCAAGTTGTTCATGCTAGGGTGGTAACTGATAGAGCATCAGGCTGCTCTAAAGGGTTTGGTTTTGTACAATATTCTACTACAGAAGAGGCTGCAAAGGGCATTGAAAACATGGATGGAAAGTTTCTGGATGGTTGGGTTATATTTGCAGAGTATGCAAGACCAAGAGAATGGCCAGATATGATGTTTCCCCTTGGTTTTTCCAGTAAGAGGTCGGTGACGGACCGACCTGGTCCACAATAG | 429 | 0.4988 | MAMRAAAQRGLRRLFCTNPYSPPSATAATSAPKTLEPNPTLFVSGLNKRTTPERLLEEFSKFGQVVHARVVTDRASGCSKGFGFVQYSTTEEAAKGIENMDGKFLDGWVIFAEYARPREWPDMMFPLGFSSKRSVTDRPGPQ* | 143 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aev10g2336 | 142 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 41 | 107 | IPR000504 | GO:0003723 | |
Aev10g2336 | 142 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 39 | 117 | IPR000504 | GO:0003723 | |
Aev10g2336 | 142 | SUPERFAMILY | RNA-binding domain, RBD | 28 | 126 | IPR035979 | GO:0003676 | |
Aev10g2336 | 142 | Gene3D | - | 16 | 121 | IPR012677 | - | |
Aev10g2336 | 142 | PANTHER | GLYCINE-RICH RNA-BINDING PROTEIN 3, MITOCHONDRIAL-LIKE | 2 | 123 | - | - | |
Aev10g2336 | 142 | SMART | rrm1_1 | 40 | 113 | IPR000504 | GO:0003723 | |
Aev10g2336 | 142 | PANTHER | TRANSFORMER-2-RELATED | 2 | 123 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aev10g2336 | Aev-Chr10 | 23188397 | 23189824 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aev10g2336 | 40 | 139 | Eukaryotic Initiation Factors Gene Family | AT4G34110 | 33.000 | 1.49e-10 | 56.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aev10g2336 | - | - | gmx:100789351 | 164.081 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aev10g2336 | 10 | 23188397 | 23189824 | Aev10g2336 | 10 | 23188397 | 23189824 | ECH |