Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g2336 ATGGCGATGAGGGCGGCGGCGCAGCGAGGCTTACGCCGGCTATTCTGCACCAATCCTTATTCTCCGCCGTCGGCAACTGCGGCGACTTCTGCTCCGAAAACGCTGGAACCCAACCCTACCCTCTTTGTTTCCGGACTTAACAAACGTACGACCCCAGAGAGGCTGCTCGAAGAATTTTCCAAGTTTGGTCAAGTTGTTCATGCTAGGGTGGTAACTGATAGAGCATCAGGCTGCTCTAAAGGGTTTGGTTTTGTACAATATTCTACTACAGAAGAGGCTGCAAAGGGCATTGAAAACATGGATGGAAAGTTTCTGGATGGTTGGGTTATATTTGCAGAGTATGCAAGACCAAGAGAATGGCCAGATATGATGTTTCCCCTTGGTTTTTCCAGTAAGAGGTCGGTGACGGACCGACCTGGTCCACAATAG 429 0.4988 MAMRAAAQRGLRRLFCTNPYSPPSATAATSAPKTLEPNPTLFVSGLNKRTTPERLLEEFSKFGQVVHARVVTDRASGCSKGFGFVQYSTTEEAAKGIENMDGKFLDGWVIFAEYARPREWPDMMFPLGFSSKRSVTDRPGPQ* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g2336 142 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 41 107 IPR000504 GO:0003723
Aev10g2336 142 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 39 117 IPR000504 GO:0003723
Aev10g2336 142 SUPERFAMILY RNA-binding domain, RBD 28 126 IPR035979 GO:0003676
Aev10g2336 142 Gene3D - 16 121 IPR012677 -
Aev10g2336 142 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 3, MITOCHONDRIAL-LIKE 2 123 - -
Aev10g2336 142 SMART rrm1_1 40 113 IPR000504 GO:0003723
Aev10g2336 142 PANTHER TRANSFORMER-2-RELATED 2 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g2336 Aev-Chr10 23188397 23189824 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g2336 40 139 Eukaryotic Initiation Factors Gene Family AT4G34110 33.000 1.49e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g2336 - - gmx:100789351 164.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g2336 10 23188397 23189824 Aev10g2336 10 23188397 23189824 ECH