Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g2329 ATGAGAGAGGAGTCAACAGGACTAATCATTGGGATCTCCATAGGTGTAGTTATTGGCGTTGTTTTGGCTATTTCTGCACTTCTCTGCTTTAGGTACCATAGGAAGCGATCGCAGATTGGGAATAGCAGTTCTAGGAGGGCAGCTACCATACCAATTCGCGCTAATGGCGCCGATTCGTGTACTATTCTATCAGACTCAACCTTAGGCCCCGAGTCGCCTGTGAAGTCCGGGCGGAATGGCATGTCCCTCTGGATTGATGGATTTAAGAAGAGCAACATGGTTTCAGCATCTGGTATACCAGAATATTCATACAAGGATTTGCAGAAGGCAACCTATAATTTTACAACACTCATAGGACAAGGTGCATTTGGTCCTGTTTATAAAGCTCAGATGTCCACTGGTGAGACTGTTGCAGTTAAAGTTCTTGCCACAAATTCTAAGCAAGGAGAGAAAGAATTTCACACAGAGGTTATGTTGTTGGGAAGGTTACACCACAGAAACCTGGTGAATTTGGTTGGATACTGTGCAGAAAAGGGGCAGCATATGCTTGTATATGTCTACATGAGTAAAGGCAGCTTGGCTTCCCACTTGTATAGCGAAGAGAATGGGTTGCTGGGCTGGGATTTGAGAGTTCATATAGCTTTAGATGTAGCAAGAGGCTTGGAGTATCTTCATGATGGAGCAGTTCCTCCTGTAATCCATAGAGATATCAAGTCTTCCAATATTCTCTTGGACCAGTCCATGCGAGCCAGGGTTGCTGATTTTGGACTCTCGCGAGAAGAGGTGGTGGATAAACAGGCAGCTATTCGCGGCACCTTCGGTTACCTCGACCCAGAGTACATATCTTCAGGGACATTCACTAAGAAAAGCGATGTATACAGTTTCGGAGTGTTGCTCTTCGAGCTTATAGCTGGTAGAAATCCTCAGCAAGGTCTTATGGAATATGTTGAACTTGCAGCAATGAACACTGAGGGAAAAGTTGGTTGGGAGGAGATTGTTGATTCAAGGCTAGAGGGAAAATGTGATTTCCAAGAGCTCAATGAAGTGGCAGCACTTGCATACAGATGCATCAACCGCGCCCCGAGGAGGCGCCCTTCGATGAGGGACGTAGTTCAAGTGTTGACAAGGATCCTTAAGTCAAGGCACCATAGAAATAATCATCATCACAAGAAGTCCTTATCAGCTACTGCAGATGAAGTTTCCATTGATATTGATAATACAGACAGCAAGAAGCAGAGCAAAGAAGAAGAAGAAGAAGAAGCAGCAGCAAGAGCAACACTTGTAGCAATGGCTGCAGCAGCTATGGCTGCTCTTCAGAGCTCAATGACGTCCCTTTACCTCTCATCTAACTCATTCTTCGGACAGCGTCTCTCTCCCATCACTCTCTCCCCTCCTTTGACTAAGTCGACCGAGAAACAATGTCTTATTGTAATGAAGCTTAAGCGATGGGAGCGAAAGAAATGCAAACCAAACAGTCTTCCCATCTTGCACAAAATGCATGTTAAGGTTGGAGATACTGTAAAAGTCATATCTGGAAATGATAAGGGGAAAGTTGGGGAGATCACCAGGCTCTTCAAGCATAACAGCACTGTCATAGTGAAAGACTTAAATTTGAAGACGAAACATATGAAGAGTAGAGAAGAGGGGGAACCAGGGCAAATCATTAAGATTGAAGGCCCTATCCACAGCTCAAATGTGATGCTGTACTCGAAAGAACAAAATGTTGCGAGCCGCGTCGGTCATAAAGTTCTTGAAAACGGTAAAAGAGTCCGCTACCTTGTAAAAACTGGAGAGATAATTGATAGTGCAGAGAATTGGAAGAAACTGAAAGAAGAAGGTCAAAAAACTGAAGAAGTTGCTGCTACCTAA 1869 0.443 MREESTGLIIGISIGVVIGVVLAISALLCFRYHRKRSQIGNSSSRRAATIPIRANGADSCTILSDSTLGPESPVKSGRNGMSLWIDGFKKSNMVSASGIPEYSYKDLQKATYNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATNSKQGEKEFHTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVYMSKGSLASHLYSEENGLLGWDLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEVVDKQAAIRGTFGYLDPEYISSGTFTKKSDVYSFGVLLFELIAGRNPQQGLMEYVELAAMNTEGKVGWEEIVDSRLEGKCDFQELNEVAALAYRCINRAPRRRPSMRDVVQVLTRILKSRHHRNNHHHKKSLSATADEVSIDIDNTDSKKQSKEEEEEEAAARATLVAMAAAAMAALQSSMTSLYLSSNSFFGQRLSPITLSPPLTKSTEKQCLIVMKLKRWERKKCKPNSLPILHKMHVKVGDTVKVISGNDKGKVGEITRLFKHNSTVIVKDLNLKTKHMKSREEGEPGQIIKIEGPIHSSNVMLYSKEQNVASRVGHKVLENGKRVRYLVKTGEIIDSAENWKKLKEEGQKTEEVAAT* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g2329 622 Hamap 50S ribosomal protein L24 [rplX]. 499 595 IPR003256 GO:0003735|GO:0005840|GO:0006412
Aev10g2329 622 SUPERFAMILY Translation proteins SH3-like domain 497 599 IPR008991 -
Aev10g2329 622 ProSiteProfiles Protein kinase domain profile. 112 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev10g2329 622 CDD STKc_IRAK 118 377 - -
Aev10g2329 622 ProSitePatterns Ribosomal protein L24 signature. 504 521 IPR005825 GO:0003735|GO:0005840|GO:0006412
Aev10g2329 622 CDD KOW_RPL26 504 568 IPR041988 GO:0003723
Aev10g2329 622 Gene3D Transferase(Phosphotransferase) domain 1 188 403 - -
Aev10g2329 622 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
Aev10g2329 622 SMART kow_9 500 527 IPR005824 -
Aev10g2329 622 SMART serkin_6 112 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev10g2329 622 SUPERFAMILY Protein kinase-like (PK-like) 101 388 IPR011009 -
Aev10g2329 622 PANTHER OS01G0253100 PROTEIN 6 405 IPR045271 GO:0004714|GO:0006468
Aev10g2329 622 TIGRFAM rplX_bact: ribosomal protein uL24 498 600 IPR003256 GO:0003735|GO:0005840|GO:0006412
Aev10g2329 622 Gene3D Phosphorylase Kinase; domain 1 85 187 - -
Aev10g2329 622 Gene3D - 494 599 IPR014722 -
Aev10g2329 622 Pfam Protein tyrosine and serine/threonine kinase 114 374 IPR001245 GO:0004672|GO:0006468
Aev10g2329 622 Pfam Ribosomal proteins 50S L24/mitochondrial 39S L24 536 600 IPR003256 GO:0003735|GO:0005840|GO:0006412
Aev10g2329 622 PANTHER CALCIUM/CALMODULIN-REGULATED RECEPTOR-LIKE KINASE 1 6 405 - -
Aev10g2329 622 Pfam KOW motif 503 534 IPR005824 -
Aev10g2329 622 Coils Coil 404 424 - -
Aev10g2329 622 MobiDBLite consensus disorder prediction 403 422 - -
Aev10g2329 622 MobiDBLite consensus disorder prediction 381 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g2329 Aev-Chr10 23135264 23140563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g2329 24 434 Glycoside Hydrolase AT3G07070 37.209 7.77e-74 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Aev10g2329 PK_Tyr_Ser-Thr 5.9e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g2329 - - gmx:100817345 733.791