Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g2318 ATGGTTTCCCCCGAAAACACCAATTGGCTCTTCGATTATGCGTTGATCGACGATATCTCTGTCCCCGACGGCCCCTTCACCGTCTCTGCTCCGACCTTCTCCTGGCCTTCTCAGCAGCAGTTGAATGCTCCCTCCAATGTCGGCGCTGAAATTGATGGCTCATCCGGGGATTCTGACGGTATCAAAGAGTCTGGTCCAAAGAAGAGGGGCAGATCTGATTCATGTGCTCCTTCGAGCTCCAAGGCATGTCGGGAGAAGTTGCGGAGGGACAGGCTGAATGACAAGTTTGTTGAATTAGGCTCCATCTTGGAGCCTGGAAGGCCTCCCAAAACAGACAAGGCTGCTATTCTGATTGATGCTGTTCGAATGGTGACACAGTTGCGAGGTGAAGCCCAGAAGTTGAAAGACTCAAATGTAAACCTCCAGGAGAAGATCAAAGAGTTAAAGGCTGAGAAGAACGAACTTCGCGACGAGAAACAAAGGCTCAAAGCAGAGAAAGAGAAGTTGGAGCTGCAGTTGAAATCTATGAATGCTCAACCTGGTTTCTTGCCACCACCTCCTGCAATCCCTGCTGCTGCTGCATTTGCTCCACAAGGTCAAGCTCCTGGCAACAAGTTGGTGCCTTTTATCAGCTACCCTGGAGTTGCCATGTGGCAATTTATGCCACCTGCTGCAGTCGATACCTCACAGGATCATGTACTTCGTCCTCCAGTTGCCTAA 720 0.5042 MVSPENTNWLFDYALIDDISVPDGPFTVSAPTFSWPSQQQLNAPSNVGAEIDGSSGDSDGIKESGPKKRGRSDSCAPSSSKACREKLRRDRLNDKFVELGSILEPGRPPKTDKAAILIDAVRMVTQLRGEAQKLKDSNVNLQEKIKELKAEKNELRDEKQRLKAEKEKLELQLKSMNAQPGFLPPPPAIPAAAAFAPQGQAPGNKLVPFISYPGVAMWQFMPPAAVDTSQDHVLRPPVA* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g2318 239 Gene3D - 79 154 IPR036638 GO:0046983
Aev10g2318 239 Pfam Helix-loop-helix DNA-binding domain 80 127 IPR011598 GO:0046983
Aev10g2318 239 SMART finulus 82 133 IPR011598 GO:0046983
Aev10g2318 239 PANTHER BHLH TRANSCRIPTION FACTOR 1 239 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
Aev10g2318 239 MobiDBLite consensus disorder prediction 38 87 - -
Aev10g2318 239 PANTHER BHLH DOMAIN CLASS TRANSCRIPTION FACTOR 1 239 - -
Aev10g2318 239 CDD bHLH_AtILR3_like 81 156 - -
Aev10g2318 239 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 76 127 IPR011598 GO:0046983
Aev10g2318 239 MobiDBLite consensus disorder prediction 38 52 - -
Aev10g2318 239 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 79 146 IPR036638 GO:0046983
Aev10g2318 239 Coils Coil 124 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g2318 Aev-Chr10 23089025 23091105 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g2318 1 239 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 73.333 6.35e-121 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev10g2318 HLH 4.7e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g2318 - - jre:109014401 362.844