Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g2288 ATGGCTGAGAGAATTTTCATATCTGAAGAAGATAATAATAGTACTGAGGGTAGTGGTGATATTCATTATCATGAAGCAATAAAATCCTCTTCTCTAAAGCGTTCATTCTTTGACTTGAATGAAGAAGCCGATGTAGATGTGGAATTGGATGTTAATGGAGGTGGTGATGATAGCATTATAAGTGATGAGATGAGTAACAATGACATGTCATCGTCTCAAGAAGGAGGGAATTTGAGCGGCGAAGAAAAAGGGAAAGGGACGAGAGGAGCTACCATCACTACTACTACGGTAAGGCAGTATGTACGATCCAAAATGCCTAGGCTACGTTGGACTCCTGATCTTCATCTTGCTTTTGTGCATGCGGTTGACAAGCTTGGTGGACAGGAAAGAGCAACACCTAAGTTGGTTCTCCAGTTGATGAATGTGAGAGGACTTAGCATCGCACATGTAAAGAGTCACTTGCAGATGTACCGAAGTAAAAAGCTTGATGAGTGTGGCCAAGTTGTATCTCAAAATAGGGCAATGCAAGGAAGTGGAAGGCATCAAATTTTGGAGATGTATCAAAGATTCAATGGGCAAGGTCGCTTTGGGGTTGATAACCGGAGTAGCTATAATATGCCCTCATCGCTCCTATTGAAACAACCCTATGACATCAAACCTCATGCTCCTTCAAGATTTCACCCTGCGGGGGTTTTCAATAGTCAAATGGTTACAAGAAGATCATCATCAAGTTTGGCGTGGGAGAAAGATTCAAGGTTATATGAGGAGGCAAGGTCACATCTATTTGATGTAAGGGATGCAATAGCAAGAAATGAACCTTTGATAAGATCTAATTGCCAAATACTTGAAGATATGAATAAGTGGCCTCTGATTGGGGCAATGGATGGATCACAAGAAGTTTTAAGCATTTGTAGGGATTCTTATGACAAGTACTGTAGTAGTAGTGCACAACCTTCTCCATGGAGGAGCACTGGTTGTATCATCAGTAATCAATATCAACCTAGTTCTTGCACTCCTATCTCCCCTGCCCATGCTAAATTTGATGCTGATGAGATTCGTGCACTAAAAGACCAAAGGGTAGAAAGGATGAATGAGAAGAAAGGGCCATCATCACCAAGTTTCCTAGAACTAAAGCTAAGCCAAGATTCAGGGAAGAATCAAGAAAGTGATGATATCAACACGAAGCTCTCTCTTTCCTTGTTCTCATCATCATCATCAAATACAAGGCATCGAGCACAATTATTTAGTGATGAGAATCACAGAGACAGTAAAAGTAGCCAGCAGCAGCAGATTGAGAATTATTTGTGTTTACAGAATTATTGCGCACCAACAAGGAGTCGTTTGGGCTAA 1350 0.4111 MAERIFISEEDNNSTEGSGDIHYHEAIKSSSLKRSFFDLNEEADVDVELDVNGGGDDSIISDEMSNNDMSSSQEGGNLSGEEKGKGTRGATITTTTVRQYVRSKMPRLRWTPDLHLAFVHAVDKLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDECGQVVSQNRAMQGSGRHQILEMYQRFNGQGRFGVDNRSSYNMPSSLLLKQPYDIKPHAPSRFHPAGVFNSQMVTRRSSSSLAWEKDSRLYEEARSHLFDVRDAIARNEPLIRSNCQILEDMNKWPLIGAMDGSQEVLSICRDSYDKYCSSSAQPSPWRSTGCIISNQYQPSSCTPISPAHAKFDADEIRALKDQRVERMNEKKGPSSPSFLELKLSQDSGKNQESDDINTKLSLSLFSSSSSNTRHRAQLFSDENHRDSKSSQQQQIENYLCLQNYCAPTRSRLG* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g2288 449 PANTHER MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN 63 429 - -
Aev10g2288 449 MobiDBLite consensus disorder prediction 1 20 - -
Aev10g2288 449 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 102 162 IPR017930 -
Aev10g2288 449 MobiDBLite consensus disorder prediction 362 391 - -
Aev10g2288 449 MobiDBLite consensus disorder prediction 59 78 - -
Aev10g2288 449 Pfam Myb-like DNA-binding domain 108 158 IPR001005 -
Aev10g2288 449 Gene3D - 105 162 - -
Aev10g2288 449 MobiDBLite consensus disorder prediction 49 91 - -
Aev10g2288 449 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 63 429 IPR044848 GO:0003700
Aev10g2288 449 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 106 161 IPR006447 GO:0003677
Aev10g2288 449 SUPERFAMILY Homeodomain-like 104 160 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g2288 Aev-Chr10 22906748 22909606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g2288 94 163 G2-like Transcription Factor Family AT2G42660 78.571 2.05e-33 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aev10g2288 Myb_DNA-binding 9.6e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g2288 - - aip:107612165 332.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g2288 10 22906748 22909606 Aev10g2288 10 22906748 22909606 ECH