Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g2271 ATGGATGGTTTTGCCTCAGAGATGGTTGGCGATGATGGTTTTCAAGTGAGTTCTTGTGTTATTGGAAGTGGGTATGGTTCATCTTCTTCTCTGGTTTTGGATAGGGAGAAAGGGGAGCTGGTGGAAGCCCCTGTCAAGTTGGAGAGAAAAGGTGTGTCCCCTGAGAGAAGCATTGAAGCTTTGAAGAACCATAGTGAAGCTGAGAGGAGAAGGAGAGCAAGAATCAATTCGCACCTTGATACACTTCGCACTGTGATTCCTGGTGCTAAGAAGATGGACAAAGCATCCTTACTGGCTGAGGTTATTAGACACTTGAAAGAGCTGAAAACAAATGCAGCACAAGCCTGTGAAGGCTTAATGATACCAAAGGACAATGATGAGATCAGAGTTGAAGAACAAGAGGGTGGACTGAATGGTTTTCCTTATTCAATCAGGGCATCACTATGCTGTGAATACAAACCTGGTTTGTTGTCTGATATAAGACAAGCACTTGATGCACTTCATCTTATGATAATAAGGGCAGAGATTGCAACCTTAGGTGGAAGGATGAAGAATGTCTTTGTCATAATTAGCTGCAATGAACATAACTTTGAAGATGCCGAAAACCGACAGTTCCTTGCTGGCTCAGTCCACCAAGCTCTTAGATCAGTACTGGATAGATTTTCGGTTTCTCAGGATATGTTAGGATCAAGAAAGAGAAGGAGAATTTCTATCTTCAGTTCATCATCTTTAGATGATTTTTTGTGA 747 0.4203 MDGFASEMVGDDGFQVSSCVIGSGYGSSSSLVLDREKGELVEAPVKLERKGVSPERSIEALKNHSEAERRRRARINSHLDTLRTVIPGAKKMDKASLLAEVIRHLKELKTNAAQACEGLMIPKDNDEIRVEEQEGGLNGFPYSIRASLCCEYKPGLLSDIRQALDALHLMIIRAEIATLGGRMKNVFVIISCNEHNFEDAENRQFLAGSVHQALRSVLDRFSVSQDMLGSRKRRRISIFSSSSLDDFL* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g2271 248 PANTHER TRANSCRIPTION FACTOR BHLH30 1 248 IPR045847 GO:0003700|GO:0006355
Aev10g2271 248 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 59 108 IPR011598 GO:0046983
Aev10g2271 248 SMART finulus 65 114 IPR011598 GO:0046983
Aev10g2271 248 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 63 111 IPR036638 GO:0046983
Aev10g2271 248 Gene3D - 55 116 IPR036638 GO:0046983
Aev10g2271 248 Pfam Helix-loop-helix DNA-binding domain 63 108 IPR011598 GO:0046983
Aev10g2271 248 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 1 248 - -
Aev10g2271 248 SUPERFAMILY ACT-like 147 223 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g2271 Aev-Chr10 22778615 22780400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g2271 46 237 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 40.306 2.15e-34 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev10g2271 HLH 2.5e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g2271 - - gmx:100783322 380.948