Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g2260 ATGAGTAGTAATAACACTGCTTACTATTTCGATGACCACAACAATAATAATAACCGCAATGACGATGATGATCCATTCTTCAATTTCCACAATAACCCACCTCAATCACACGGCGATTGGAACAAGAGGATCCTCTACATGGCCATTATTTCCTTAACATTTGTCCTGTTTTTGGTGTTTGCACTCCACATTTACGCCCGGTATGTCCTGAGACGCCAGGCTCGCCGCCGCCTCGCCATTCGCCGCCTCAGCCTCACCGTTGCGCAATCCATGGAATCACAAAACAACTCCTCGGGGGGCCTCCACCCTAGCGTCATATCCACTCTCCCAACCTTCATCTTCAAGCAGAAGAAAACCCGAGAACAAGATCAAGAACAACTCCAAGATGATGAGGAGGAGTGTGCGGTGTGTTTGAGTGGCGTAGAGGATGAAGAAACGGTTAGGTTGTTACCAAATTGCAAGCACACTTTCCACGTTGGTTGCATAGATGCATGGCTGGCATCGCATTCCACGTGTCCAGTTTGTAGGGCTAAGGTTGAGCCAACAGTGCTGATAAGGAGGATTGAGCCTCAGCCACGTGAGGGTCCTATTGGTGGTGCACCAACAATAACAGTAACGGCTCCACCCTTGTTAGTTGATCAACGAATAATTACTGAAGGCACTTCCGAAGGTGATAGTGCCAAAACTAGCGGCGCTTCAAGGTTGAGCTCTTTCAGGAGGGTTCTTAGTAGGGAGAGATCGTCTAGGAGGATTCAACCTTTTAGCCACGATGGTGGTGATCATGATGTTGAACACGATGATTTAGAGAGGCAGTAG 816 0.4804 MSSNNTAYYFDDHNNNNNRNDDDDPFFNFHNNPPQSHGDWNKRILYMAIISLTFVLFLVFALHIYARYVLRRQARRRLAIRRLSLTVAQSMESQNNSSGGLHPSVISTLPTFIFKQKKTREQDQEQLQDDEEECAVCLSGVEDEETVRLLPNCKHTFHVGCIDAWLASHSTCPVCRAKVEPTVLIRRIEPQPREGPIGGAPTITVTAPPLLVDQRIITEGTSEGDSAKTSGASRLSSFRRVLSRERSSRRIQPFSHDGGDHDVEHDDLERQ* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g2260 271 MobiDBLite consensus disorder prediction 239 271 - -
Aev10g2260 271 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 87 182 IPR013083 -
Aev10g2260 271 PANTHER RING FINGER DOMAIN-CONTAINING 40 271 - -
Aev10g2260 271 MobiDBLite consensus disorder prediction 219 237 - -
Aev10g2260 271 Pfam Ring finger domain 133 176 IPR001841 -
Aev10g2260 271 SUPERFAMILY RING/U-box 124 182 - -
Aev10g2260 271 SMART ring_2 134 175 IPR001841 -
Aev10g2260 271 PANTHER RING-H2 FINGER PROTEIN ATL40-LIKE 40 271 - -
Aev10g2260 271 CDD RING-H2_PA-TM-RING 133 176 - -
Aev10g2260 271 MobiDBLite consensus disorder prediction 219 271 - -
Aev10g2260 271 MobiDBLite consensus disorder prediction 10 30 - -
Aev10g2260 271 ProSiteProfiles Zinc finger RING-type profile. 134 176 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g2260 Aev-Chr10 22690141 22690956 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g2260 20 271 C3H Transcription Factor Family AT2G42360 44.275 2.51e-56 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g2260 K19038 - gmx:100780265 202.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g2260 10 22690141 22690956 Aev10g2260 10 22690141 22690956 ECH