Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g2245 ATGGCTGCTAAAAAGATGATGGATGATGGAGAAGTACTTTCCAACGGTTTCTCTCATCCGAGTCACCAATCTGCTGCGGCTGCTGCTTCATCTAATAATAACAATCCTACTCCTCTTTTGAAAAGGAAGAGAAACTTACCTGGAAACCCAGATCCTGAAGCTGAAGTGATAGCCCTGTCACCAAAGACCCTGATGGCGACAAACAGGTTTGTGTGTGAAATCTGCCTAAAGGGGTTCCAGAGGGATCAGAACCTTCAGCTGCACAGACGCGGGCACAACCTGCCATGGAAGCTGAAGCAGAGGACCAGCAAAGAGCCGAGGAAGAGAGTGTACGTGTGCCCTGAGAAGACGTGCGTCCACCACCACCCTTCAAGGGCTCTCGGGGACTTGACTGGGATCAAGAAGCACTTCTGCAGGAAGCACGGCGAGAAGAAGTGGAAGTGCGACAAGTGCTCTAAGCGCTATGCGGTTCAGTCTGATTGGAAAGCTCACTCTAAGACTTGTGGAACCAGAGAGTACAAATGTGACTGTGGAACCATCTTTTCGAGGAGGGACAGCTTCATCACTCACAGGGCCTTCTGTGATGCATTAGCAGAAGAAACAGCTAGGGTAAACGCAGCATCATCACACATAACCAACCCATTGGTGGGTGGTAACAACATCAACATTGGTTACAGCCTGATGCAAAATTCCTTGGGGCCAAGCATGGCATCCCATTTTTCATCAATTTTCAAGCCAATTTCAAGCAATGATGAAACAGGCAATAATATCCAAACATCAAGGGGCCTCTCACTTTGGATGGGTCAAGCTCAAGCATCTCATGAAACAATAGCCAGTGGCAACAATTTTCATGAGATTCACCGACTTGGTTCTGTTACAACCCCAGCATCAGCAATATATGGTGGTGGTGGTGGTAACCCGCTTGTTTCATGCTCAAATCCACCACCACCCTCTAATAACTACCAGCTTAATTGGGTTTTTGCAAATAATAAGATCTCATCATCCATTAATAATGGGAATCATCAAGAGATTATAACTAGCAACAGCAACAACAATAATGCTAATTCACTTCCGCTAGTGAACATTGTTAAGGAAAGTAGTGGAAAGCAGCTTATAAGTGTTCCTTCCTTGTACAGCTCACAGCATCATCAAACAAATTCTTCATCAGCAAACATGTCTGCAACAGCTCTGTTGCAGAAAGCTGCTCAGATTGGAGCAACTTCTTCGCATGACCCTTCATTCCTTGGGAGCTTAGGTTTGAAATGCACTAGTAGTAACAATAATAACAACCAGGGTCAAGATGGGAACAATTTTTGTGGCATGTACACTTCAACTTCACTGCTCACTAGTCTTGGTAGTGAGGCAGACAGCTCTCCAGGTGATTTGACACAAATGCCCCCATCTAAAAGAATTCACCTACAGAATAATGAAGAGGCTAGCACTGCTGCAGCAGGGGGACAGACTAGGGATTTTCTTGGTGTTGGTGTGCAAACTATTTGCCACCCTTCATCAATTAGTGGGTGGATTTGA 1530 0.4549 MAAKKMMDDGEVLSNGFSHPSHQSAAAAASSNNNNPTPLLKRKRNLPGNPDPEAEVIALSPKTLMATNRFVCEICLKGFQRDQNLQLHRRGHNLPWKLKQRTSKEPRKRVYVCPEKTCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFITHRAFCDALAEETARVNAASSHITNPLVGGNNINIGYSLMQNSLGPSMASHFSSIFKPISSNDETGNNIQTSRGLSLWMGQAQASHETIASGNNFHEIHRLGSVTTPASAIYGGGGGNPLVSCSNPPPPSNNYQLNWVFANNKISSSINNGNHQEIITSNSNNNNANSLPLVNIVKESSGKQLISVPSLYSSQHHQTNSSSANMSATALLQKAAQIGATSSHDPSFLGSLGLKCTSSNNNNNQGQDGNNFCGMYTSTSLLTSLGSEADSSPGDLTQMPPSKRIHLQNNEEASTAAAGGQTRDFLGVGVQTICHPSSISGWI* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g2245 509 ProSiteProfiles Zinc finger C2H2 type domain profile. 70 92 IPR013087 -
Aev10g2245 509 Gene3D Classic Zinc Finger 103 194 - -
Aev10g2245 509 MobiDBLite consensus disorder prediction 1 53 - -
Aev10g2245 509 ProSitePatterns Zinc finger C2H2 type domain signature. 72 92 IPR013087 -
Aev10g2245 509 PANTHER F-BOX ASSOCIATED PROTEIN 34 500 - -
Aev10g2245 509 MobiDBLite consensus disorder prediction 16 40 - -
Aev10g2245 509 SUPERFAMILY beta-beta-alpha zinc fingers 69 166 IPR036236 -
Aev10g2245 509 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 34 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g2245 Aev-Chr10 22613844 22617962 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g2245 35 509 IDZ Gene Family AT1G03840 50.288 2.80e-146 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev10g2245 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g2245 K25870 - gmx:100778666 610.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g2245 10 22613844 22617962 Aev10g2245 10 22613844 22617962 ECH