Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g2240 ATGCTAGCGGTGGCGGTGTCAGCAGCTTTGAGAAGGAGCGACAAAGATGAGCAGCAAGGAGAAGAAGAGACGACGGAGAACAGCAGCAAGTACTACGATGATGAGTTGCTGGGCGATCATGAATTATCAGTATCACTATCCCCCCAAGGGGGCTTCTTGTTGGAAAGCATCAGCTTCGACGATCTCTTCGCCGGAATCGACGACGTCTTGCCCGATCTCGAAATGGACCCCGCAGATTTGTTCCCTCCTCACTTCTCCTCGCTCACTAGCACTACTGGACCTCATGATCATCACAACAACAACAATACTAGTGCTATTATTAGTATGCCACCTGATGATGGAGGTAGTAATAATAAATCAGCTTCTTCTCCTTCTTCTTCTTCTGATTCAGATTCGGGTGGCTCAATTAGTAAAGGAGACGAGATTACTGTAGTCATGAGCAAAAGAGATGACGATGAAGAATCCCTGCTGCTGAATCCATCACCCACCAACGATAACAATCATAATAAGGAAATTAGTGAGAAAGGAAGAAAATCATCATCATCAAAAAGTCCTCCTACTCAAGGAAAGAAAAAGGTTAAGAAGGTGGATTGGACCCCGGAACTGCACAGGCGATTCGTGCAGGCAGTGGAGCAACTGGGAGTGGACAAGGCAGTGCCTTCACGGATTTTGGAGGTTATGGGGATTCACTGTCTCACCCGCCATAACATTGCTAGCCACCTTCAAAAATATCGATCACACAGGAAACATCTGTTAGCAAGAGAAGCAGAAGCAGCAAGCTGGAGTCAAAGGAGGCAAATGTTGCAGCAGGGGAAGAGATCAGAGGGCAGCCCTCCTTGGGTTGCACCAACCATTGGATTCCCTCCGATGCCGATGCCGATGCCAATGCCAATGCCAATGCCCCATTTCAGACCCTCCCTACATGTTTGGGGCCACCCCACCCCCATCGACCACCAACCCCTTTTGCACATTTGGCCTAAACCTAATTCACCTTCACCACCTCCTGCTTGGGCTCCTCCTCCACCTAATTCAGACCCTGCATTCTGGCACCACCCTAGGGGTCCAAACGCGCTAAGCCCAACCCCAGGAGCAGCGTGTTATCCACGACCTCCTCTGACAACAACGAGATTTGGGTGTCCAACTCCAACTACTACTACTACTACTGTAGCAGCCCCTACTGCAGGCGTTCCACCAGCACCCCATGCAATGTACAAACTAGTTGATCCAGGAATTGCCCTTCCCGCTCGCCAACCTCCTCCACCACCCCTATCTGACTTCCATCCGTCAAAGGAAAGTGTAGATGCAGCGATTGGAGATGTTTTGTCAAAGCCATGGCTACCACTGCCTCTTGGGCTCAAAGCTCCAGCGATTGAAAGTGTGATGGGTGAATTACAGAGACAGGGAATTCCAAAAGTGCCACCCTCTTGTGCTTGA 1434 0.4993 MLAVAVSAALRRSDKDEQQGEEETTENSSKYYDDELLGDHELSVSLSPQGGFLLESISFDDLFAGIDDVLPDLEMDPADLFPPHFSSLTSTTGPHDHHNNNNTSAIISMPPDDGGSNNKSASSPSSSSDSDSGGSISKGDEITVVMSKRDDDEESLLLNPSPTNDNNHNKEISEKGRKSSSSKSPPTQGKKKVKKVDWTPELHRRFVQAVEQLGVDKAVPSRILEVMGIHCLTRHNIASHLQKYRSHRKHLLAREAEAASWSQRRQMLQQGKRSEGSPPWVAPTIGFPPMPMPMPMPMPMPHFRPSLHVWGHPTPIDHQPLLHIWPKPNSPSPPPAWAPPPPNSDPAFWHHPRGPNALSPTPGAACYPRPPLTTTRFGCPTPTTTTTTVAAPTAGVPPAPHAMYKLVDPGIALPARQPPPPPLSDFHPSKESVDAAIGDVLSKPWLPLPLGLKAPAIESVMGELQRQGIPKVPPSCA* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g2240 477 MobiDBLite consensus disorder prediction 84 196 - -
Aev10g2240 477 MobiDBLite consensus disorder prediction 84 137 - -
Aev10g2240 477 Pfam Myb-like DNA-binding domain 196 245 IPR001005 -
Aev10g2240 477 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 476 - -
Aev10g2240 477 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 194 247 IPR006447 GO:0003677
Aev10g2240 477 Gene3D - 190 251 - -
Aev10g2240 477 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 190 249 IPR017930 -
Aev10g2240 477 SUPERFAMILY Homeodomain-like 194 250 IPR009057 -
Aev10g2240 477 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 476 IPR044825 GO:0003700|GO:0045893
Aev10g2240 477 MobiDBLite consensus disorder prediction 327 355 - -
Aev10g2240 477 MobiDBLite consensus disorder prediction 327 348 - -
Aev10g2240 477 MobiDBLite consensus disorder prediction 10 34 - -
Aev10g2240 477 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g2240 Aev-Chr10 22579672 22583782 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g2240 191 332 G2-like Transcription Factor Family AT5G44190 63.699 1.35e-47 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aev10g2240 Myb_DNA-binding 2.9e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g2240 - - gmx:100775671 358.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g2240 10 22579672 22583782 Aev10g2240 10 22579672 22583782 ECH