Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g2233 ATGCGAAACCCTCTATCCTCAATGGCGGTGAAGCAGAAGCATAGCGCAAAGAACAAGGAACATCAACCAAACAACAATGCCAACAATAAGGAGGTTCACTACAGGGGCGTCAGGAAGAGGCCCTGGGGCCGTTACGCCGCCGAGATCCGAGATCCCGGCAAGAAGAGCCGCGTCTGGCTCGGAACCTTCGATACCGCCGAAGAAGCCGCCATGGCCTACGACGCCGCCGCCAGGCAGTTCCGTGGTCCCAAGGCCAAGACCAACTTCCCTTCCCCAAACGACGAAAACGAAGTCGTCGCCAGCCACCACTGCAACATCGTTGAGTCATCCGGGACCGACGCGCCTGCGCGTGGAGTCACGCGCCAGAATGATGCGTTGTTGTTCCCCTTTTTCCCCTATGGTGGTGCTGAGGGCGTTGTTGCACCGGTGCGCCCTGTTTTGTTTACTGAACCGGCTGGGATAGTTGAGTTTGTTGGAGAGCGTTGCCCTTTTCGGTGCGAACCGGTTCCGGTCCGGTTTAGTGAGCGGTCTGGTGGTGGAGCACACAGTGACTCGGATTCATCCTCAGCCGTTGATTGTAAACCGAAGGGAGCGCTTAACCTTGATCTAAACCTCGCTCTTCCAATTGATGCTTAA 636 0.566 MRNPLSSMAVKQKHSAKNKEHQPNNNANNKEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAMAYDAAARQFRGPKAKTNFPSPNDENEVVASHHCNIVESSGTDAPARGVTRQNDALLFPFFPYGGAEGVVAPVRPVLFTEPAGIVEFVGERCPFRCEPVPVRFSERSGGGAHSDSDSSSAVDCKPKGALNLDLNLALPIDA* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g2233 211 MobiDBLite consensus disorder prediction 13 36 - -
Aev10g2233 211 Pfam AP2 domain 33 82 IPR001471 GO:0003700|GO:0006355
Aev10g2233 211 SUPERFAMILY DNA-binding domain 33 91 IPR016177 GO:0003677
Aev10g2233 211 SMART rav1_2 33 96 IPR001471 GO:0003700|GO:0006355
Aev10g2233 211 MobiDBLite consensus disorder prediction 173 192 - -
Aev10g2233 211 MobiDBLite consensus disorder prediction 1 36 - -
Aev10g2233 211 Gene3D AP2/ERF domain 32 91 IPR036955 GO:0003700|GO:0006355
Aev10g2233 211 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 21 97 - -
Aev10g2233 211 CDD AP2 33 90 IPR001471 GO:0003700|GO:0006355
Aev10g2233 211 PRINTS Ethylene responsive element binding protein signature 56 72 IPR001471 GO:0003700|GO:0006355
Aev10g2233 211 PRINTS Ethylene responsive element binding protein signature 34 45 IPR001471 GO:0003700|GO:0006355
Aev10g2233 211 ProSiteProfiles AP2/ERF domain profile. 33 90 IPR001471 GO:0003700|GO:0006355
Aev10g2233 211 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 21 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g2233 Aev-Chr10 22555057 22555692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g2233 30 209 AP2-EREBP Transcription Factor Family AT5G44210 47.541 1.79e-44 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev10g2233 AP2 1.4e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g2233 K09286 - qsu:112001675 195.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g2233 10 22555057 22555692 Aev10g2233 10 22555057 22555692 ECH
Aev10g2233 10 22555057 22555692 Aev04g0550 04 3417894 3418613 ECH