Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g2229 ATGCCTGCACAGAAGCGCTCCTTTCCCGAGCCTCTCGACGATGGGGACTCCTCCCTCTTCCCTCACCGCCACCCCAAGCACCGCAACCTCAAACCCCTCGAAGAAAACGACGATGATGCTGACAGCCAGCACCACGAGGAAGAGGAGGAGCAGGAGCAGGAGGAGCAGGGGGATGTAGAAGAAGAGGAAGAGGAACAGCAACAACAAGAAGAAGCTGAAGAAGAAGAAGAAGATGATGATGATGATGATAACGACGAAGATGAAGATGGAGATGAAGACGAAGACGAAGAGGAAGATGAAGATGAAGCAGAGCAGCAACAGAACCAAGACAGGGATAAACCAGATGATTCTGACGACACCCCATCTTCTGGTTCTGAGGAAAAACCCGAATTTGTGTTTGTAGAACTTCTGGAAATTCGTAAAGATGTCCAATGTCCAATTTGCCTTGGGATTATTAAGAAAACAAGAACTGTTATGGAATGCCTGCATCGGTTCTGCAGGGAATGCATTGACAAGTCAATGCGACTTGGGAACAATGAATGCCCTGCTTGCCGAACACATTGTGCCAGTCGCCGTTCCTTGAGAGATGATCCGAAATATGATGCCCTTATTGCTGCCTTGTATCCAGATATTGAGAAGTATGAGGAAGAGGAACTTGAGTTTCGTGAAGAGGAGAAGAACCGGAATAAGCAGTCACTGGTCAACATTCAGATTCAAGCTTCAATTGCAAAAGTTGTTCAACGGCAGTCTGAAGCACTGGTTAAGAGACGTAAAGATTCATCAAGTGGGGGATTTGGGACTAGATCACAGCGTAATCAGCGGAATGTTCAATCTAGGAGGCAAAACCAAGTGATTGATGTTCAAGGATCTGAAGAAAATGAGGAGGAAAATGACAATAATGAAAAAGACTCATCTTCTGCTGATGAGAGGGGTACAGAGCTCCGACAGAGAAGGCGAAAGAGATGGACCAGAGTTCGCCCCTCTCAGCCCTCGTCATCAATGGCAAGTCCTGATGGCGGAGGCATAGAAAGTGACTTGGATATCAGTAGAGAAAATCGAGGAATTTCAAGGCAGGTGTCAAAACCTCGAAAGCTTACCTGGGGAAGGGGTGGTTTTAGAAGTAACACTCGGCATGGCAGTGGTGGTGGTAGCAATAGCAAAAGTTCTCGCAGTCGAGTGTCTAAGCTTGTTGATTATCTTCGGAACTTGGATGAAAACACCAATGAGTTAGATGTCCATCTCATGCTTTTTTCTCTGGATAAACAAAGTACACCAAGTTTGCAGCACCCACACCTTTGCTGTCACCCAACTTTGTCTGTCAAGCACCTTTGTGAATATGTCGCTCTTCAAACACCATTGCCAGTTGAAGAAGTTGAGATATTGGCAGTTAAAGGATGTTGCAGCGCAAATGGCGATGACAAGTCAACCAACGAGACTTCAGCCTTGATCTGTGATGAGCTTACAACTATGGTTATAGATCCATCCAAAGATGAACTGGAAATTTTGCAGGGTGATGAATCTTTAGAAGGGGTTAGATCCAAATGCATATCTAAAAAGGAGCATTTGATTCTAGCATTCAGGAGGAAGGAGGCACTATAG 1599 0.4559 MPAQKRSFPEPLDDGDSSLFPHRHPKHRNLKPLEENDDDADSQHHEEEEEQEQEEQGDVEEEEEEQQQQEEAEEEEEDDDDDDNDEDEDGDEDEDEEEDEDEAEQQQNQDRDKPDDSDDTPSSGSEEKPEFVFVELLEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPKYDALIAALYPDIEKYEEEELEFREEEKNRNKQSLVNIQIQASIAKVVQRQSEALVKRRKDSSSGGFGTRSQRNQRNVQSRRQNQVIDVQGSEENEEENDNNEKDSSSADERGTELRQRRRKRWTRVRPSQPSSSMASPDGGGIESDLDISRENRGISRQVSKPRKLTWGRGGFRSNTRHGSGGGSNSKSSRSRVSKLVDYLRNLDENTNELDVHLMLFSLDKQSTPSLQHPHLCCHPTLSVKHLCEYVALQTPLPVEEVEILAVKGCCSANGDDKSTNETSALICDELTTMVIDPSKDELEILQGDESLEGVRSKCISKKEHLILAFRRKEAL* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g2229 532 SMART ring_2 145 184 IPR001841 -
Aev10g2229 532 Pfam Zinc finger, C3HC4 type (RING finger) 144 184 - -
Aev10g2229 532 PANTHER OS11G0578200 PROTEIN 85 530 IPR044592 -
Aev10g2229 532 SUPERFAMILY RING/U-box 132 199 - -
Aev10g2229 532 ProSiteProfiles Zinc finger RING-type profile. 145 185 IPR001841 -
Aev10g2229 532 MobiDBLite consensus disorder prediction 40 105 - -
Aev10g2229 532 Coils Coil 211 231 - -
Aev10g2229 532 MobiDBLite consensus disorder prediction 1 129 - -
Aev10g2229 532 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 85 215 IPR013083 -
Aev10g2229 532 MobiDBLite consensus disorder prediction 106 129 - -
Aev10g2229 532 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RING1A-RELATED 85 530 - -
Aev10g2229 532 ProSitePatterns Zinc finger RING-type signature. 161 170 IPR017907 -
Aev10g2229 532 MobiDBLite consensus disorder prediction 344 358 - -
Aev10g2229 532 MobiDBLite consensus disorder prediction 377 391 - -
Aev10g2229 532 MobiDBLite consensus disorder prediction 9 39 - -
Aev10g2229 532 MobiDBLite consensus disorder prediction 263 288 - -
Aev10g2229 532 CDD RING-HC_RING1_like 145 185 - -
Aev10g2229 532 Coils Coil 42 82 - -
Aev10g2229 532 MobiDBLite consensus disorder prediction 252 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g2229 Aev-Chr10 22524054 22529253 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g2229 138 208 C3H Transcription Factor Family AT3G23060 35.135 4.66e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g2229 K10695 - gmx:100776547 592.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g2229 10 22524054 22529253 Aev10g2229 10 22524054 22529253 ECH