Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g2225 ATGGAAGAATCAGCTAAGAACAGTAACAGATTCAGAAACAAGAGTGTGGATGAAGACAGGCAAGATTTGGAGAAGATTGAAAAGGGTGTTGATTTAAGCTTTCAGAGGCGACAATGGAAGCCAGTTTTTGATGATGCTTCCATTTCATATAACAGGCCTCTCAAGAAGATTCGTAGCCCTGAACGTTCTTCTTCCTTTTCTTCTTCTTCTTCTTCGTCTCTTCAACTTCAACAACCTCTTTCTCCACCTTCTTCTTGCTCTGTTCCTGTTCAATCTTCCACACCAACAACGACACCTTCTCCATCATCCTCTTCAAGGATCGTTTTCCCTTTTGCATTTGATTCCCCACAACAGCACCCCTTGCAAATGCCGCATCAGTTCCACCAGCACCAATATGGATATGGAACCACCACCACAGACACAAACTTGCCTTTTTTGCTTCCACCATTTCACCCAACTCCACAGAACCACCAACATCATCATCATCAACAACAACAACAACAAATGATATCTTTCGGTTCTCAATCCCATCCCCAACAACAACAACAGCAACAGAACATAGGTTATCCAACGATGCTACAACAACAGCAACAGCATCATCAACAGCTTCTTCAGTATTGGAGTGAAGCACTGAATCTAAGTCCAAGAGGGAGAATGATGATGATGAACAGGTTGGGAGCAGATGGTAGACCATTGATGAGGCCACCAGCACAGCCACTGAACACCACAAAGCTCTATAGAGGTGTGAGACAGCGCCATTGGGGAAAATGGGTCGCTGAGATTCGCTTACCTCGAAACAGAACTCGCCTCTGGCTCGGCACATTCGACACTGCAGAAGATGCTGCTATGGCATATGATCGTGAAGCCTTCAAGCTTAGAGGTGAGAATGCAAGGCTCAATTTCCCTGAACTCTTCCTCAACAAAGATAAAGCACCTTCCAACAACAACAATAATGCTACAAATACTTCATCCGCATCTTCTTCCATTGCCACAACAACAGAGGAACCTGAAGCAGTTTCTGAAGGTAATGTGAATTTGGAAAAAGGCACAATGGAAGAGGCTAATGAGAATAATGATTCAGGAATTGGGTCGGGCGATGCTGCTACTGTGAGTGAAGGGGTTTCACAATCACAGTCTCAGGAACTGGTTTGGGGGGAAATGTCTGCATGGTTCAATGCTATTCCTGCAGGTTGGGGTCCAGGTAGTCCTGTTTGGGATGATTTGGACACAACCAGCAATCTTTTTCTGCACTCACAGATTCCATTTGCGAACACAAATCAGCAGCAGCATGAATCATTCAATGATGATTCTGATGCTCTGAGACAAGATGATAATCATCATATATAA 1347 0.4417 MEESAKNSNRFRNKSVDEDRQDLEKIEKGVDLSFQRRQWKPVFDDASISYNRPLKKIRSPERSSSFSSSSSSSLQLQQPLSPPSSCSVPVQSSTPTTTPSPSSSSRIVFPFAFDSPQQHPLQMPHQFHQHQYGYGTTTTDTNLPFLLPPFHPTPQNHQHHHHQQQQQQMISFGSQSHPQQQQQQQNIGYPTMLQQQQQHHQQLLQYWSEALNLSPRGRMMMMNRLGADGRPLMRPPAQPLNTTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAAMAYDREAFKLRGENARLNFPELFLNKDKAPSNNNNNATNTSSASSSIATTTEEPEAVSEGNVNLEKGTMEEANENNDSGIGSGDAATVSEGVSQSQSQELVWGEMSAWFNAIPAGWGPGSPVWDDLDTTSNLFLHSQIPFANTNQQQHESFNDDSDALRQDDNHHI* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g2225 448 MobiDBLite consensus disorder prediction 60 108 - -
Aev10g2225 448 MobiDBLite consensus disorder prediction 1 30 - -
Aev10g2225 448 MobiDBLite consensus disorder prediction 309 339 - -
Aev10g2225 448 SUPERFAMILY DNA-binding domain 245 303 IPR016177 GO:0003677
Aev10g2225 448 Pfam AP2 domain 246 294 IPR001471 GO:0003700|GO:0006355
Aev10g2225 448 MobiDBLite consensus disorder prediction 355 379 - -
Aev10g2225 448 MobiDBLite consensus disorder prediction 428 448 - -
Aev10g2225 448 MobiDBLite consensus disorder prediction 434 448 - -
Aev10g2225 448 MobiDBLite consensus disorder prediction 159 185 - -
Aev10g2225 448 ProSiteProfiles AP2/ERF domain profile. 245 302 IPR001471 GO:0003700|GO:0006355
Aev10g2225 448 SMART rav1_2 245 308 IPR001471 GO:0003700|GO:0006355
Aev10g2225 448 MobiDBLite consensus disorder prediction 50 108 - -
Aev10g2225 448 CDD AP2 244 304 IPR001471 GO:0003700|GO:0006355
Aev10g2225 448 MobiDBLite consensus disorder prediction 148 185 - -
Aev10g2225 448 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 6 432 - -
Aev10g2225 448 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF053 6 432 - -
Aev10g2225 448 Gene3D AP2/ERF domain 245 303 IPR036955 GO:0003700|GO:0006355
Aev10g2225 448 PRINTS Ethylene responsive element binding protein signature 268 284 IPR001471 GO:0003700|GO:0006355
Aev10g2225 448 PRINTS Ethylene responsive element binding protein signature 246 257 IPR001471 GO:0003700|GO:0006355
Aev10g2225 448 MobiDBLite consensus disorder prediction 307 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g2225 Aev-Chr10 22494360 22495706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g2225 141 407 AP2-EREBP Transcription Factor Family AT2G20880 51.095 3.94e-67 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev10g2225 AP2 3e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g2225 - - gmx:100809887 389.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g2225 10 22494360 22495706 Aev10g2225 10 22494360 22495706 ECH